Search Results for "sql command line" - Page 22
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Showing 2376 open source projects for "sql command line"
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...ETFOMM can be used as a DLL as a substitute for CORSIM in the TSIS package. It is compatible with TRAFED and TRAFVU. ETFOMM can also be used as a separate executable from a Windows or Linux command line. ETFOMM may also be linked into another application using the provided Application Programming Interface (API). TRAFVU and TRAFED are trademarks of ITT Industries, Inc., Systems Division.
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Calculation of radiation view factors by adaptive integration. A cross-platform port of the public-domain code by George Walton.
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Kinannote
Protein Kinase Identification and Classification
...If the user inputs a complete proteome, additional modules evaluate the completeness of the kinome and place it in context with reference kinomes. Kinannote runs on a unix command line and depends on local hmmer 2 and Blast 2.24 installations. Citing Kinannote: Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily Jonathan M. Goldberg; Allison Griggs; Janet L. Smith; Brian Haas; Jennifer Wortman; Qiandong Zeng Bioinformatics 2013; doi: 10.1093/bioinformatics/btt419 http: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full pdf: http://bioinformatics.oxfordjournals.org/content/29/19/2387.full.pdf+html -
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AFNER is a C++ named entity recognition system that uses machine learning techniques. It is customisable to various domains. It also allows for multiple and overlapping named entity labels.
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Go from Code to Production URL in SecondsSkip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.
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COTSon scalable simulation infrastructure
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ADMS is a code generator that converts electrical compact device models specified in high-level description language into ready-to-compile c code for the API of spice simulators. Repository migrated to: https://github.com/Qucs/ADMS For checkout do: git clone https://github.com/Qucs/ADMS.git
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SPANDx
Comparative analysis of haploid next-generation genome sequence data
...The outputs generated by SPANDx can be imported into PLINK for microbial genome-wide association study (mGWAS) analyses. SPANDx can utilise PBS, SGE or SLURM for resource management. SPANDx can also run directly on the command line if no resource manager is available. For the most up-to-date version of SPANDx, check us out on GitHub: https://github.com/dsarov/SPANDx -
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**** This page is not used for this project any longer. *** Please update your bookmarks and go to https://github.com/UUPharmacometrics/PsN
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Advanced Simulation Library
Free multiphysics simulation software package
Advanced Simulation Library (ASL) is a free and open source multiphysics simulation software package. Its computational engine is based, among others, on the Lattice Boltzmann Methods (http://en.wikipedia.org/wiki/Lattice_Boltzmann_methods) and is written in OpenCL (http://en.wikipedia.org/wiki/OpenCL) which enable extraordinarily efficient deployment (http://asl.org.il/benchmarks) on a variety of massively parallel architectures, ranging from inexpensive FPGAs, DSPs and GPUs up to... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Primenum
Calculation of Primenumbers
*Changelog: NOW AS A DEB PACKAGE! Only for Unix-and unixoid Operating Systems! (It is programmed on Linux Ubuntu 15.10) You can with the Shell- and Python Program calc prime numbers to, no: NO LIMIT (Okay, maybe the processor speed: Calculation of prime numbers to 1.000.000 prime numbers a AMD Athon II M300 goes to 90min! and by a i7 6700HQ 12min!) A installer and README is to package packed ;-) -
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libunits
ultimative units calculation and conversion tool and library
The ultimative shared library to do calculations(!) and conversions with any units! Includes all SI and pseudo SI units and thousands of US, Imperial and other units. 10th of thousands of typical dimensions are recognised as well. An easy API for calculations is available as well as a ncurses based calculator providing RPN and algebraic mode. -
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Krona
Hierarchical data browser
Krona allows hierarchical data to be explored with zoomable HTML5 pie charts. Krona charts can be created using an Excel template or Krona Tools, which includes support for several bioinformatics tools and raw data formats. -
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orthos
Simulation of EPR spectra of nitroxide biradicals
The program Orthos is developed to performed simulation (including nonlinear least-squares fitting) of EPR spectra of nitroxide biradicals. The program capabilities include simulation of rigid-limit and slow-motional spectra, of both isotropic and aligned samples. The spectra of multiple paramagnetic species, both bi- and monoradicals can be modeled. NB: Please note that now (as of Nov 2016) the distribution is being updated so that to improve reliability, OS-universality, and the quality... -
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The Maltcms - Modular Application Toolkit for Chromatography Mass-Spectrometry is a JAVA API for preprocessing, alignment, analysis and visualization of data stored in open file formats used in Proteomics and Metabolomics research.
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metawatt
Binner for assembled metagenomes
The Metawatt binner is a graphical binning tool that makes use of multivariate statistics of tetranucleotide frequencies and differential coverage based binning. It also performs taxonomic assessment of binning quality (via diamond BLASTx). Created bins can be edited and exported as fasta. The Metawatt is implemented in Java SWING and minimally depends on Diamond, HMMer3.1, BBMap, Prodigal and the Batik library for the export of SVG graphics. Citation: Strous M, Kraft B, Bisdorf R,... -
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Taurus
A python based User Interface library.
The Taurus Project has *moved* to: https://github.com/taurus-org/taurus This SourceForge page is *outdated* and kept for historical reference only. Taurus is a python framework for control and data acquisition CLIs and GUIs in scientific/industrial environments. It supports multiple control systems or data sources: Tango, EPICS, ... New control system libraries and data sources can be integrated through plugins. -
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SystemC-WMS (Wave Mixed Signal Simulator) is a class library that extends the standard SystemC kernel to allow modeling and simulation of complex systems comprising analog parts from heterogeneous domain (electrical, mechanical, thermal, ...).
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Volterra2.0
Volterra series Identification Tool
Orthogonal method for the Identification of Volterra series. It is an extension of Lee-Schetzen method with two major improvments: 1. Reduced identification uncertainty in diagonal kernel points. 2. Possibility to identify each Volterra kernel with an input with different variance. This feature reduces the identification noise on lower order kernels and improve the "resolution" on higher order kernels. For reference see: Simone Orcioni. Improving the approximation ability of... -
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Crux-Toolkit
Software toolkit for tandem mass spectrometry analysis
Crux is a software toolkit for tandem mass spectrometry analysis, with a focus on peptide identification. If you use Crux in your research, please cite Christopher Y. Park, Aaron A. Klammer, Lukas Käll, Michael J. MacCoss and William Stafford Noble. "Rapid and accurate peptide identification from tandem mass spectra." Journal of Proteome Research. 7(7):3022--3027, 2008. -
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GBTIDL provides offline data reduction for spectral line data from the GBT, a single dish radio telescope. Although the GBTIDL code is open source, running it requires you to have your own IDL license and base package.
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TER implements the CCSDS Recommendation for Image Data Compression (CCSDS 122.0-B-1). TER also adds new features to the Recommendation. TER is designed and programmed with the aim to provide a good basis to test and develop the CCSDS Recommendation.
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This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
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GFinisher
genome assembler finisher, gap, gap close, sort contig
GFinisher is an application tools for refinement and finalization of prokaryotic genomes assemblies using the bias of GC Skew to identify assembly errors and organizes the contigs/scaffolds with genomes references. contact dievalg at gmail.com -
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PriorityPruner is a software program which can prune a list of SNPs that are in high linkage disequilibrium (LD) with other SNPs in the list, while preferentially keeping SNPs of higher priority (e.g., the most significant SNPs in a genome-wide association study).
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Suite of tools for DNA sequence analysis - searching (EST, mRNA, sequencer reads); aligning (ESTs, mRNA, whole genome); and analysis (repeats, kmers).
