Showing 2579 open source projects for "command-line kill linux"

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  • 1
    The OpenGEREA is a open enrichment analysis framework for gene expression regulation data analysis.
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  • 2
    vinylsimtool

    vinylsimtool

    vinylsimtool: simulation of vinyl record playback

    vinylsimtool: Simulation of audio artifacts of vinyl record playback systems, based on physical modelling. --- vinylsimtool: Simple command-line tool for WAV file processing. Copyright (c) 2017 by Klaus Michael Indlekofer. All rights reserved. --- Vinylsimtool-Plugin-VST: Real-time plug-in. Copyright (c) 2017-2019 by Klaus Michael Indlekofer and Sebastian Marcus Edelmann. All rights reserved. Note: Special restrictions apply. See disclaimers below and within the distribution. (We are...
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  • 3
    Camino
    Camino is a free, open-source software package for simulation, analysis and reconstruction of Diffusion MRI data. Download the latest version of the code by clicking the "Code" tab and then "Download Snapshot". The green download button will get the latest major change (updated less frequently). For tutorials and more information, visit http://camino.org.uk. CAMINO IS A RESEARCH TOOL ONLY AND SHOULD NOT BE USED FOR CLINICAL PURPOSES. In downloading the code you explicitly agree to...
    Downloads: 2 This Week
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  • 4
    Software for exploring & solving polyform puzzles, written in Python. Includes solvers for: pentominoes/polyominoes, solid pentominoes, Soma cubes, polycubes, polyiamonds, polyhexes, polysticks, and more to come.
    Downloads: 1 This Week
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  • 5
    CSV-Sanitizer

    CSV-Sanitizer

    Allows the user to automatically create non-sensitive, sanitized CSVs

    This project will allow the user to create non-sensitive, sanitized CSVs automatically, given any CSVs present. Its purpose? Create an easy way for people to share tasks or code that rely on sensitive CSVs, without exposing sensitive data. This project is conducted in Python3. Please see the Readme for more information :)
    Downloads: 0 This Week
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  • 6
    GFS view

    GFS view

    GFS view is the program for generate and display weather forecas

    GFS view is the program to generate and display weather forecast maps from the National Centers for Environmental Prediction (NCEP) GFS data Quick and easy access to instant weather forecast data of the NCEP center Download many data sets at once: by several days, many issued time and many forecast times, by the variable time step and any combinations of grib code-level-heights Filter data on the server to save bandwidth, downloading time and a disk space, extensive set of...
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  • 7
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
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  • 8

    rRNAFinder

    Fast ribosomal RNA detector and annotator

    rRNAFinder is a small perl software package, which can be used to automatically predict and classify the ribosome RNA genes using the assembled genome/metagenome contigs as input. The software were only tested on the Linux operating system. "rRNAFinder.pl" program included in the package uses nhmmer program searching against the arc.hmm, bac.hmm, and euk.hmm databases to identify rRNA genes from the input contigs. The predicated rRNA genes include 16S, 18S, 23S, 28S, 5S, and 5.8S rRNA...
    Downloads: 0 This Week
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  • 9
    Surface development.
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  • 10
    Meteorological Product Exchanger

    Meteorological Product Exchanger

    Sundew:a tcp/ip WMO switch, Sarracenia: next gen transfer engine.

    We have moved to https://github.com/MetPX everything on sourceforge is obsolete. metpx is the Meteorological Product Exchanger. Intended for use in industrial/government weather forecast operations, for exchange of meteorological bulletins over TCP/IP.
    Downloads: 0 This Week
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  • 11
    Gerber2eps - A small program for converting Gerber RS-274D files to Encapsulated Postscript (EPS).
    Downloads: 0 This Week
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  • 12

    Safe Harbor Deidentification

    Safe Harbor Deidentification for medical documents

    Phalanx - Deidentify Safe Harbor Deidentification Mode of Phalanx is an abridged pipeline of NLP annotators culminating in NER annotators which write output of text offsets. It uses the Safe Harbor deidentification method.
    Downloads: 0 This Week
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  • 13

    slurm-roll

    Slurm Resource Manager for Rocks Clusters

    Slurm is a replacement for other resource management software and schedulers like gridengine or torque. The slurm roll integrates very well into a rocks clusters installation. In the folder addons, there are a lot of useful rolls for rocks clusters 6.1 and 6.2. These rolls do not depend on slurm. Please see Discussion for further information and support
    Downloads: 0 This Week
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  • 14

    FTimes

    A forensic system baselining, searching, and evidence collection tool

    FTimes is a forensic system baselining, searching, and evidence collection tool. Its primary purpose is to gather and/or develop topographical information and attributes about specified directories and files in a manner conducive to intrusion and forensic analysis.
    Downloads: 0 This Week
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  • 15

    PTESFinder

    Post-Transcriptional Exon Shuffling (PTES) Identification Pipeline

    PTESFinder is a computational pipeline for identifying Post-transcriptional Exon Shuffling events from high-throughput RNAseq data. PTESFinder leverages the power of established RNASeq tools and systematically excludes all known classes of false positive structures by applying stringent filters designed to specifically target these false positives. PTESFinder compares alignment qualities of reads mapping to putative PTES structures with qualities of the same reads when mapped to genomic...
    Downloads: 0 This Week
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  • 16

    ParamIT

    a Toolset for Molecular Mechanical Force Field Parameterization

    ParamIT is a toolkit aiding the development of molecular mechanical force field parameterization of small, drag like, molecules within CHARMM general force field (CGenFF) protocol. The developed toolkit helps the researchers in following ways: 1) automating the creation of multiple input files for quantum and molecular mechanics programs, 2) automating the output analysis and 3) substitute the use of full MM programs with a faster specialized one. The developed tools include: 1) generator of...
    Downloads: 0 This Week
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  • 17
    DRC generates digital room correction FIR filters to be used within HiFi systems in conjunction with real time convolution engines like BruteFIR.
    Downloads: 14 This Week
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  • 18
    DESMO-J is a framework for rapidly building discrete event driven simulation models in Java, which is not restrained to any particular domain of application. It supports both event-oriented and process-oriented modelling views. See http://desmoj.de.
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    Downloads: 9 This Week
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  • 19
    ParseCNV CNV call association software takes CNV calls as input and creates SNP based statistics for CNV occurrence in population study cases and controls then calls CNVRs based on neighboring SNPs of similar significance.
    Downloads: 0 This Week
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  • 20
    Silicolife delivers applications such as an Excel to database loader, tools, and utilities such as effective exception handling. New techniques and technologies can be tried out in a real world context by developers and advanced end users.
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  • 21

    OpenM++

    OpenM++: open source microsimulation platform

    IMPORTANT: ========== Our project home page: https://openmpp.org Our latest source code and release available at: https://github.com/openmpp/main/releases/latest Our documentation available at: https://github.com/openmpp/openmpp.github.io/wiki SourceForge files still exist for historical reason. OpenM++ is an open source microsimulation platform inspired by and compatible with Modgen. OpenM++, compared to its closed source predecessor Modgen, has advantages like portability,...
    Downloads: 0 This Week
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  • 22
    pyGear

    pyGear

    Precise gear geometry generator for spur and helical gears

    A python gear generator that serves as CAE/CAD-preprocessor for involute gears based on pythonOCC. It allows for the computation of dynamic properties and the creation of exact geometries from a minimal input set. PyGear can simulate the tool geometry and kinematics of standard gear hobbing tools to generate precise flank, tooth root and tip geometries.
    Downloads: 8 This Week
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  • 23

    CUDASW++: Smith-Waterman Algorithm

    The fastest Smith-Waterman protein database search algorithm on GPUs

    CUDASW++ software is a public open source software for Smith-Waterman protein database searches on Graphics Processing Units with CUDA. This software have been added to the NVIDIA Tesla Bio Workbench (http://www.nvidia.com/object/swplusplus_on_tesla.html
    Downloads: 0 This Week
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  • 24

    CUDALucas

    A program that uses CUDA to accelerate the Lucas Lehmer test.

    CUDALucas is a program implementing the Lucas-Lehmer primality test for Mersenne numbers using the Fast Fourier Transform implemented by nVidia's cuFFT library. You need a CUDA-capable nVidia card with compute compatibility >= 1.3 up to CUDA 6.5, 2.x up to 7.0 and 3.x for >=CUDA 8.0 . The program is run from the command line, however it can be configured without using a terminal. See the Wiki for more details. README for new users available at the Files/Downloads page.
    Downloads: 2 This Week
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  • 25
    The Elvira project is a suite of tools to perform high-throughput genomic assemblies of repetitive, structured samples such as viruses or targeted regions of larger genomes.
    Downloads: 0 This Week
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