CUDASW++: Smith-Waterman Algorithm Icon

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The fastest Smith-Waterman protein database search algorithm on GPUs

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ease 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 3 / 5
features 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5 3 / 5
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User Reviews

  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    We have already removed the code dependency on CUDA SDK, and the software can be directly compiled using CUDA 5.0 and higher versions.

    Posted 07/24/2015
  • 1 of 5 2 of 5 3 of 5 4 of 5 5 of 5

    This has NOT been updated for beyond CUDA 4.1. Cutil.h is no longer in CUDA since CUDA 5.0. Now here we are on CUDA 6.0! Please update this software.

    Posted 07/01/2014

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