Open Source Java Scientific/Engineering Software - Page 78

Internet Documentation and Integration of Metadata (IDIOM)

Java API for controling 1394 Digital Cameras (based on libdc1394: http://sourceforge.net/projects/libdc1394/ for Linux, and on: CMU 1394 DC http://www-2.cs.cmu.edu/~iwan/1394/ for Win32). On Top of the library comes a RCP plugin and a JMF capture dev

Open Source project for the development of the IEEE 11073-20601 reference implementation.

IFS Tools is a set of Java applets for the interactive, graphical construction of iterated function system (IFS) fractals. Output is in the form of IFS code and graphics.

The main goal of this project is the development of an IFX Transaction Switch that handle particular devices like an ATM (J/XFS compliant), POS in the future, and other devices that speak a common language: IFX

IGBM (Identification of gene blocks in microorganisms) implements a BLAST-like method to infer conserved gene clusters among closely related prokaryotes, and provides a graphical user interface to navigate the identified clusters and their annotated info

IGRAFU is an open source program to integrate solutions to rebuild phylogenetic trees. It supports various well-known algorithms, such as Maximum Parsimony and Distance-matrix methods.

Testing tools source code of the Integrating the Healthcare Enterprise (IHE) PIX and PDQ v3 Integration Profiles

Testing tools source code of the Integrating the Healthcare Enterprise (IHE) Cross-Enterprise Document Sharing for Images (XDS-I) Integration Profile

IIControl is a library for controlling fischertechnik models via the Intelligent Interface. IIControl is written in Java and provides complete abstraction from the interface and the hassle controling the serial port.

ILA stands for (kind of) intelligent, learning assistant and is a speech recognition system aka voice assistant very similar to Siri, Google Now and Cortana. ILA is fully customizable and you can teach her/him/it new things by yourself like executing system commands, opening web pages, programs and apps or just some basic conversation :-) ILA runs on Java und thus is compatible to Windows, Mac and Linux. It is designed to integrate with your home enviroment and for example build up your own, free and open Amazon Echo replacement ;-) Right now the key components of ILA are the open source speech recognition CMU Sphinx-4, Google (Speech Recognition/Text-To-Speech) and MaryTTS (Text-To-Speech). The goal is to make ILA completely free of Google by improving all aspects of the open source systems. Since version 3.3 users can also write own add-ons to extend ILA. ILA's successor is the SEPIA Framework: https://sepia-framework.github.io/ Hope you enjoy ILA - Florian

ILEDocs is a documentation tool which helps the software developers to document their programs in a convenient way similar to javadoc.

IMG Parser written in Java

IMG2GSLIB is a small command line tool that converts images to grids into GEO-EAS format readable by geoscientific software such as GSLIB, SGeMS, Isatis, Gocad, Petrel, etc. It now can output 3D volumes from image stacking. The ASCII result is sent to stdout, so you can redirect it using the > operator if you want to save it to a file. Run java -jar IMG2GSLIB.jar without arguments to get help on usage. Requirements: -Java 1.7

Graphical User Interface for a software used to assess adaptive evolution in protein-coding genes. Makes use of several known bioinformatics software. IMPACT is free software, targeted to the scientific community. Maldonado E, Dutheil JY, da Fonseca RR, Vasconcelos V, Antunes A (2011) IMPACT: Integrated Multiprogram Platform for Analyses in ConTest. Journal of Heredity, 102 (3): 366-369. doi: https://doi.org/10.1093/jhered/esr003

Maldonado E, Sunagar K, Almeida D, Vasconcelos V, Antunes A (2014) IMPACT_S: Integrated Multiprogram Platform to Analyze and Combine Tests of Selection. PLoS ONE 9(10): e96243. doi: https://doi.org/10.1371/journal.pone.0096243

A Java library implementing the INDI distributed control protocol (http://indilib.org). Designed to easily implement new INDI Clients (graphical and not graphical ones), INDI Drivers and INDI Servers. We have started a complete overall of the project with many more drivers the staging site with the current development state can be found here http://indiforjava.sourceforge.net/stage/

Software for Identification of Crystal System. Java-based, OS-independent.

A desktop application which is written in Java programming language. You can use it to educational purposes. This application by knowing the host IP address and the subnet mask can count network IP address, broadcast address and how many hosts can be at the network, Also shows binary operations.

The IPDR.org reference libraries encode and decode IPDR usage documents in either XML or the binary format. Libraries are available in C and Java.

IPSYS is a time-step simulation tool for power systems with a focus on power system control.

IQM has moved to GitHub

This is an IQM plugin to compute the FFI index for binary digital images. This index represents a value for the compactness of an object. FFI is the difference between fractal dimensions of the area and its boundary. Fractal dimensions are computed with the popular Box counting method or the Pyramid method. Details can be found in: Andronache etal. Fractal analysis for studying the evolution of forests, Chaos, Solitons & Fractals, 2016, Vol 91, 310-318. Installation instruction: Copy newest jar file to the "Plugins" directory which should be located in the directory of your local IQM main application. IQM: https://sourceforge.net/projects/iqm/ Authors of this plugin: Ion Andronache, University of Bukarest, Romania Daniel Peptenatu, University of Bukarest, Romania Helmut Ahammer, Medical University of Graz, Austria

This is an IQM plugin to compute fractal dimensions and lacunarities of 2D digital images using several methods. By Martin Reiss Installation instruction: Copy newest jar file to the "Plugins" directory which should be located in the directory of your local IQM main application. IQM: https://sourceforge.net/projects/iqm/

IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. If you have any question about IQuant, please contact me: wenbo@genomics.cn. The source code of IQuant can be found here "https://sourceforge.net/p/iquant/code/".