Showing 4270 open source projects for "java profiler windows"

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  • 1
    famos

    famos

    Framework for Agent-oriented MOdelling and Simulation

    Famos is a Java-based framework for developing agent-based models. It uses the discrete-event simulation framework Desmo-J (http://desmoj.sourceforge.net) as its simulation engine. Famos implements event-driven time advance and focusses on supporting an explicit model of space for the environment, including the movement of agents. Famos was developed in the context of a PhD project. Many aspects of its implementation are therefore still in the prototype stage. It does come with two...
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  • 2

    Factory Equipment Network Testing

    Measurement science-based performance & conformance testing framework

    Real-time production information is needed to optimize manufacturing activities in a factory, but acquiring this information from isolated proprietary equipment is a manual process that takes time and introduces errors. Connecting equipment to the factory network can make accurate production information immediately available, but widespread interconnection of equipment has been inhibited by the lack of common information models and methods to measure performance and conformance. This project...
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  • 3
    HLM is a proof assistant for everyday mathematics, which is currently being developed. It aims for a user experience as close as possible to regular mathematical practice, and proofs which are understandable by humans with little extra effort.
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  • 4

    TriageTools

    Tools for partitioning and prioritizing fastq data

    TriageTools is a collection of tools for partitioning raw data (fastq reads) from high-throughput sequencing projects. The tools are designed for basic data management as well for prioritizing analysis of certain subsets. The project wiki contains usage information.
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  • 5

    JCycles

    [frozen] A library for computing cycles in graphs or in Java code.

    [This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (<...
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  • 6
    PNP is a program for tutorial purposes in the signal processing area. It allows to set, move and remove poles and zeros of an one dimensional digital filter. The program shows different effects of the filter in the frequency domain.
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  • 7

    Saferwater

    Helping to improve drinking water safety where there isn't much.

    This program helps the user risk assess the raw water quality, aids in determining optimum clarification and filtration, aids in developing an understanding of the disinfection process, and puts it together in an easy to follow HACCP plan, which identifies the critical barriers, monitoring and limits that should be applied to ensure a reduction in the raw water risk profile. The mitigated or residual risk profile is also given (i.e. assuming HACCP plan implementation)
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  • 8

    RoboStopwatch

    Automation scheduler and monitor with stopwatch GUI widget.

    This program schedules, launches and monitors any Java Runnable object. Anything you can do from Java, you can schedule and monitor using this program. It includes a nifty stopwatch widget as a metaphor for measuring performance. The monitoring is done via event messages which are displayed in real time in a GUI dialog and stored in a JavaDB database. Any number of tasks (Runnables) can be launched and monitored simultaneously. The user / programmer of the API Jar designs their own...
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  • 9
    cy2fluxviz

    cy2fluxviz

    cy2fluxviz : Cytoscape 2 plugin for flux distribution visualization

    cy2fluxviz - Cytoscape 2 Plugin for the visualization of flux distributions in networks. Latest releases from https://github.com/matthiaskoenig/cy2fluxviz
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  • 10
    JinnIde is a plugin that allows using Jinni Prolog, now also hosted here on this site (with open source license!), within the confines of an IDE integrated in JEdit.
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  • 11

    cmotif

    A method for mining conditional phosphorylation motifs

    Phosphorylation motifs represent position-specific amino acid patterns around the phosphorylation sites in the set of phosphopeptides. The discovery of phosphorylation motifs is a very valuable work in bioinformatics. Although several algorithms have been proposed to uncover phosphorylation motifs, the problem of efficiently discovering a set of significant motifs with sufficiently high coverage and non-redundancy still remains unsolved. In this paper, we propose an algorithm called C-Motif...
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  • 12
    expressionCalc

    expressionCalc

    Cross platform Mathematical expression solver

    expressionCalc is a Mathematical expression solver. It has a Java implementation (for cross platform) and a C# implementation (for Windows). Support most of the Mathematical functions including log, sin, a sin etc. Implemented based on the expression solving technique of BODMAS.
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  • 13
    CReST

    CReST

    CReST: The Cloud Research Simulation Toolkit

    The Cloud Research Simulation Toolkit (CReST) is a cloud computing simulation platform written in Java.
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  • 14
    JPIE is an implementation of an Open Source Java to Prolog/Prolog to Java interoperability mecanism based on the Java VM.
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  • 15

    obstbaumpate

    Obstbaum Verwaltung

    Mit dem Obstbaumpaten lassen sich einfach Obstbäume an Wegesrändern verwalten.
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  • 16
    A math application written in Java. Its features include 2D and 3D graph plotting, scripting, user-defined variables and functions and skinnable GUI. This project is not maintained at the moment.
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  • 17
    OPEN GENERAL SCIENTIFIC INTERFACES
    OPEN GENERAL SCIENTIFIC INTERFACES homepage : http://www.opengsi.org
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  • 18

    EDNA

    Energy Based Multiple Sequence Alignment (MSA) for Binding Sites

    Multiple Sequence Alignment for Transcription Factor Binding Sites using Di nucleotides dependencies and relying on Free Interaction energies between neighbouring DNA bases to stabilise substitution energy of the alignment. http://www.ncbi.nlm.nih.gov/pubmed/23990411
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  • 19

    OPTIMA cidoc-crm Semantic Annotation

    Semantic annotation of archaeology reports with respect to CIDOC-CRM

    The semantic annotation system OPTIMA is the result of Andreas Vlachidis PhD work, (supervised by Prof. Douglas Tudhope, University of Glamorgan, UK). OPTIMA performs the NLP tasks of Named Entity Recognition, Relation Extraction, Negation Detection and Word Sense Disambiguation using hand-crafted rules and SKOS terminological resources (English Heritage Thesauri and Glossaries). The resulted semantic annotations are associated with classes of the (ISO 21127:2006) CIDOC Conceptual...
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  • 20
    ExpressionOasis is a java based framework for evaluating the various type of expressions like arithmatic, logic expression etc. The framework is flexible enough to define any new grammer rules or operators.
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  • 21

    Bermuda Text-to-Speech

    This project includes basic NLP and DSP techniques for Text-to-Speech

    See TTS demo at: http://rslp.racai.ro/index.php?page=tts This is an entirely written in JAVA project which includes a set of tools and methods designed to enable Multilingual Text-to-Speech (TTS) synthesis. We currently support English and Romanian but we will soon train more models and make them available for download. If you want to read more about our other NLP and TTS tools check out http://nlptools.racai.ro.
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  • 22
    Platform for Annotated Corpora in XML Integrated tool for corpus linguists built on Eclipse, Vex, Subversive, etc. for creating and editing transcriptions and annotations, querying, managing version controlled data, and building a shippable corpus.
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  • 23

    [DEPRECATED] Gene Ontology

    The DEPRECATED legacy location of the GO, see http://geneontology.org

    The DEPRECATED legacy of the Gene Ontology project on SourceForge. Please see http://geneontology.org for current software and downloads.
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  • 24
    Statcato
    Statcato is a Java software application for elementary statistics. Its features include data and graph generation, probability distributions, descriptive statistics, confidence intervals, hypothesis tests, correlation, regression, and analysis of var
    Downloads: 7 This Week
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  • 25
    Japrosim is a java library for both discrete event and continuous simulation. GUI for modeling and automatic code generation are offered. An explanation module is integrated. Models are described in XML and owl for interoperability.
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