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Multiple Sequence Alignment for Transcription Factor Binding Sites using Di nucleotides dependencies and relying on Free Interaction energies between neighbouring DNA bases to stabilise substitution energy of the alignment.

http://www.ncbi.nlm.nih.gov/pubmed/23990411

Features

Java based multiple sequence alignment of binding sites

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License

Creative Commons Attribution Non-Commercial License V2.0

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Additional Project Details

Operating Systems

BSD, Windows

Intended Audience

Science/Research

Programming Language

Java

Related Categories

Java Bio-Informatics Software

Registered

2012-05-09

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