Search Results for "raw"
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Showing 24 open source projects for "raw"
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BioXTAS RAW
Processing and analysis of Small Angle X-ray Scattering (SAXS) data.
BioXTAS RAW is a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data operations such as averaging and subtraction, analysis of radius of gyration (Rg) and molecular weight, and advanced analysis using GNOM and DAMMIF as well as electron density reconstructions using DENSS. -
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mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
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The C-Munipack is an astrophotometry software package, which offers a complete solution for reduction of images carried out by CCD or DSLR camera, intended on a observation of variable stars, exoplanets and minor Solar System bodies. It provides a simple and intuitive graphical user interface.
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The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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proex gpr control
Mala ProEx and Easy Locator GPR control software
...The GUI includes GPS datalogging capability assuming a receiver providing NMEA sentences at 4800 bauds is connected to the host computer. Because the software requires access to the raw socket communication, it must be run with administration (root) privileges. A dedicated mode for sensor reading through the wireless GPR link is implemented through 2 separate time-windows, one for subsurface structure analysis and the other for sensor signal recording. The wiki describes the cause of long term drift and hardware modification of the ProEx timing board to try to solve the issue. ... -
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IIDC Camera Control Library
Capture and control API for IIDC compliant cameras
libdc1394 is a library that provides a high level programming interface for application developers who wish to control and capture streams from IEEE 1394 based cameras that conform to the 1394-based Digital Camera Specifications (also known as the IIDC or DCAM Specifications). libdc1394 also supports some USB cameras that are IIDC compliant. Besides capture and control, libdc1394 provides a full set of colour space conversion functions (including RAW decoding), vendor specific functions and direct camera register access. Keywords: ieee1394, IIDC, DCAM, firewire, USB, machine vision, computer vision, video capture, library -
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Comet MS/MS search engine
Comet open source tandem mass spectrometry (MS/MS) search engine.
...Comet currently exists as a simple Windows or Linux command line binary that only does MS/MS database search. Supported input formats are mzXML, mzML, ms2, and Thermo RAW files. Supported output formats are tab-delimited text, Percolator pin, SQT, and pepXML Documentation and project website: http://comet-ms.sourceforge.net -
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The libbuspirate is a C library to talk with the bus pirate hardware (http://dangerousprototypes.com/docs/Bus_Pirate) in raw, binary scripting mode. The libbuspirate allows to quickly write a short C program to test interfacing with your favorite hardware. The library has mainly be used to interface through SPI with RF transceivers such as CC2500, MRF24J40, Ethernet controller such as ENC28J60, EEPROMs such as 24C02, 24FC1025, LCD display (PCD8544 / Nokia5110), LED display (HT1632), ... ...
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Ycasd
ycasd captures and scales data
Ycasd (ycasd captures and scales data) is a simple tool for capturing and scaling data from graphical representations. It can be used for retrieving data points from figures of electronically available or scanned publications for which no raw data is provided. After the figure is displayed on the screen, it only requires the definition of two pixels on each of the axes by clicking and setting their corresponding values. For each subsequent click on the figure, a coordinate pair is estimated by vector calculations and in accordance to axes definition. For more details, see http://www.biomedcentral.com/1471-2105/15/219#Sec5. -
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rawi2ctool
RAW I2C command line tool for debug, test and more
This is a Linux command line tool to do raw I2C accesses to a bus, IF SUPPORTED BY THE ADAPTER, to probe the bus, read or write some data, detect glitches, do a bench, program an EEPROM with the required blocksize, test the I2C bus driver, ... Raw I2C mode enables data frames that are not supported by SMBus and related tools (such as i2cget, i2cset, i2cdump) -
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cvastroalign
video align tool for astrophotography
cvastroalign is a program that loads a video sequence, aligns and stacks the selected frames obtaining an image as result of this process.. -
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NanocalcFX
Open Source Data Evaluation Software
NanocalcFX is a free and open source evaluation software for a simple yet comfortable solution to deal with thousands of transport kinetics measured with a fluorescence microscope or similar kinetics. Data can be imported from CSV or Excel files or using the dedicated image stack analyser (NISA). You can get sample data at the nanocalcFX homepage. Note that nanocalcFX is currently in a beta state. -
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WaveSorter
A powerful, versatile tool for offilne spike analysis and sorting
WaveSorter emphasizes dynamic visualization and versatility. Slider controls let the user select any coefficient or sample from any of several transforms, which can then be plotted to either axis of a 2D histogram (scatterplot). Within the waveform space, cursor-based controls let the user select subregions of the waveform space or individual waveforms to view. The user may cluster waveforms manually or via one of several popular clustering programs. The classification along with waveform... -
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This is a library to extract raw unicode text from any written documents (office documents such as PDF, Word, OpenOffice, ...). It should be useful to developpers of search engine, text processing, corpus analysis, ....
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Utility to convert PED genome file into RAW SNP format. Creates multiple files per person. Supports big files. The same conversion utility has been included into "aisconvert" toolkit, so this project is rather deprecated.
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FastPval is multiple stage p-value computing software that computes empirical p-values from a large set of permutated/resampled background data.
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Spotckpt is a simulator for the following study; "Reducing Costs of Spot Instances via Checkpointing in the Amazon Elastic Compute Cloud"
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Astro-raw performs standard astro-image processing at 32 bits per ch. Work flow = BadPixel replacement, DarkFrame subtract, image stacking, FlatField equalisation & 32 > 16 by gamma Sigmoid curve LUT. Output non-resolved Bayer Matrix FITS file.
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The Vector Stream library and tools allow store/load vectors (C-language raw array, not in C++ STL) to a stream (file) in a text format with an information about the vectors. This information attached to the file greatly reduces loading cost of the file.
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Post-processing navigation software for raw GPS/GNSS receiver data (pseudorange, Doppler, and carrier phase data) in stand-alone, and differential mode. Portable C foundation code. C++ for more advanced apps. NovAtel OEM4 and RINEX supported.
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libTopo and TopoMap are tools to use, convert, analyze and display topography maps such as ETOPO2, ETOPO5 and GLOBE. TopoMap is the command line interface to convert topography databases to raw data, images, etc...
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SureFit generates 3D mesh surfaces (in VTK and Caret formats) from 3D structural MRI volumes (in formats such as Analyze, AFNI, raw).
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Real-time EEG data acquisition and control software for event related potential (ERP) researchers. Writes data in ERPSS (UCSD) raw and log format and displays, in real time, in X windows.
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LabVIEW/Linux toolkit for accessing unix files (and unix device files) in a Posix conform manner. Is in production use for raw device file and realtime fifo access. LabVIEW Versions [5.1, 6.0, 6.0.1, 6.0.2]. NMT-RTL and RTAI fifos tested.
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