Search Results for "gnu linux" - Page 19
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Showing 2153 open source projects for "gnu linux"
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Toolchain for quantification of fluorescence intensity and morphological parameters in single cells using microscope based cytometry.
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RANGE: produce random genetic transcription networks in the NEMO language, which when compiled outputs models in Systems Biology Markup Language. Generate synthetic microarray data, or use NEMO alone to SBML-ize a network, or visualize it in cytoscape.
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An open-source software to convert SDF files into TINKER XYZ files (and viceversa) with automatic assignment of MMFF94 atom types, bond types and charges
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jointgen-c
A re-implementation of cl-jointgen in C
This is a re-implementation of cl-jointgen in the C programming language, for those that cannot get their head around Common Lisp. -
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Billiard 3D Project
Billiard table simulator
It could help you to carry out numerous experiments on the billiard table. ATTENTION! X Window System, GLUT, OpenAL are required (https://stackoverflow.com/questions/3907064/installing-opengl-and-openal-in-ubuntu) -
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This (Python) tool allows you to easily create FPGA bitfiles for your embedded system, from several Open Source IPs (compatibles with the OpenCores Wishbone bus) . It will also generates the corresponding drivers (currently only Linux ones).
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cvastroalign
video align tool for astrophotography
cvastroalign is a program that loads a video sequence, aligns and stacks the selected frames obtaining an image as result of this process.. -
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The HART (Hardware Access in Real-Time) Toolbox can be used to generate Scicos-blocks for hardware that have a C/C++ interface. The blocks can be used under Linux for soft and hard real time tasks (RTAI). Blocks are provided for DAQ (COMEDI).
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RPy is a very simple, yet robust, Python interface to the R Programming Language. It can manage all kinds of R objects and can execute arbitrary R functions (including the graphic functions). RPy has been superseded by the RPy2 project: https://rpy2.github.io/
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FreeSOLID is a library for collision detection of three-dimensional objects undergoing rigid motion and deformation. FreeSOLID is designed to be used in interactive 3D graphics applications.
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gsl-pt_BR
manual da gsl em pt-BR
Manual da Gnu Scientific Library em português do Brasil. O manual possui código fonte no formato texinfo. -
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libsharp
Library for spherical harmonic transforms (SHT)
NOTE: as of April 24, 2015, libsharp development has moved to Github (https://github.com/dagss/libsharp). Libsharp is a collection of algorithms for efficient conversion between maps on the sphere and their spherical harmonic coefficients. It supports a wide range of pixelisations (including HEALPix, GLESP, and ECP). This library is a successor of libpsht (http://sourceforge.net/projects/libpsht). A scientific overview over the functionality is given in the paper available at... -
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steam-sim
An accurate, scalable, and energy-aware simulator for WSNs
STEAM-Sim establishes a hardware/software/network co-simulation of wireless sensor networks. Original C code is used in simulation. The code is natively executed by the cpu where the simulation is run. The time annotation engine annotates the C source code used for simulation with the timing information as if the code is run on a microcontroller. The annotation process is fully automated. Hardware models are developed using the PAWiS framework and reflect the timing,... -
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ICN Simulator
An ICN Simulator based on the Blackadder paltform.
This is a basic implementation of an Information-Centric Network simulator, following the architecture suggested by Blackadder. It was by the University of Essex for the needs of the PAL project and it include Publishers, Subscribers, RV and a Topology Manager. -
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ECMM
OMNET++ implementation of the Enhanced Community-based Mobility Model
This project enables the introduction of community-based mobility models into the OMNET++ simulation environment. These models provide many desired characteristics, such as socially influenced mobility decisions and are quite realistic. One specific model, namely the Enhanced Community-based mobility model, is very suitable for opportunistic routing research comparing to the others, because of its advanced properties. These include a pause period, conformance to the existing social ties and... -
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KEMP
A FDTD solver for electromagnetic wave simulations on a GPU cluster
KEMP is a fast FDTD solver on a GPU-based cluster. The FDTD (Finite-Difference Time-Domain) method is a popular numerical method for electromagnetic field simulations. KEMP enables hardware accelerations suitable for multi-GPU, multi-core CPU and GPU cluster. KEMP also provide easy configuration by using Python scripting language. -
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neuranep
Neural Network Engineering Platform
A parallel-programming framework for concurrently running large numbers of small autonomous jobs, or microthreads, across multiple cores in a CPU or CPUs in a cluster. NeuraNEP emulates a distributed processing environment capable of handling millions of microthreads in parallel, for example running neural networks with millions of spiking cells. Microthreads are general processing elements that can also represent non-neural elements, such as cell populations, extracellular space, emulating... -
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Firmware for Cypress' EZ-USB (AN2131) device that lets you use keyboards, mice etc. as USB compliant Human Interface Devices.
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Planck Level-S
Sources of the simulations package for the Planck satellite project
This project contains the sources for the simulation codes used within ESA's Planck mission (http://sci.esa.int/planck/) -
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SOAPdenovo-Trans
A de novo transcriptome assembler.
Latest Codes on GitHub: https://github.com/aquaskyline/SOAPdenovo-Trans SOAPdenovo-Trans is a de novo transcriptome assembler inherited from the SOAPdenovo2 framework, designed for assembling transcriptome with alternative splicing and different expression level. The assembler provides a more comprehensive way to construct the full-length transcript sets compare to SOAPdenovo2. -
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ProC 3.0
smart Workflow Engine
ProC 3.0 is a scientific workflow engine to build, manage and execute workflows (pipelines) in heterogeneous environments, supporting GRID and other means of parallel processing. It includes a data management component (DMC) to transparently access databases for storage of results and automatically adds metadata to track the processing of data products, so that at every time a full processing history is available. The software was developed and used within the ESA Planck satellite mission. -
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SOAP3-DP
Fast, Accurate and Sensitive GPU-based Short Read Aligner
Latest Code on GitHub: https://github.com/aquaskyline/SOAP3-dp SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously. Compared with widely adopted aligners including BWA, Bowtie2, SeqAlto, CUSHAW2, GEM and GPU-based aligners BarraCUDA and CUSHAW, SOAP3-dp was found to be two to tens of times faster, while maintaining the highest sensitivity and lowest false discovery rate (FDR) on Illumina... -
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PIHMgis is a “tightly-coupled” GIS interface to Penn State Integrated Hydrologic Model (PIHM). It is open source, platform independent and extensible. The “tightly-coupled” integrated GIS interface to PIHM has been created in the Open Source QGIS
