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Showing 126 open source projects for "read"
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ScholArxiv
ScholArxiv is an open-source aesthetic and minimal app
ScholArxiv is an open-source, aesthetic and minimal app that allows users to search, read, bookmark, share, download, and view summaries of academic papers from the arXiv repository. Now you can configure your Gemini API key and converse with AI to expand and dive deeper into the papers you're exploring. -
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Bowtie 2
A fast and sensitive gapped read aligner
Bowtie 2 is a fast, memory-efficient genomic read aligner used to map sequencing reads against long reference sequences such as mammalian genomes. It is especially effective for reads ranging from around 50 bases to hundreds or thousands of characters, and it supports modern sequencing workflows that require gapped, local, and paired-end alignment. The tool builds compact FM-index-based reference indexes, keeping memory usage low even for large genomes like the human genome. -
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ThingPulse ESP8266 Weather Station
ESP8266 Weather Station library supporting OpenWeatherMap
...NTP-based time class written by Fabrice Weinberg. We fixed many bugs and improved performance and changed the API a little bit. Either compare your code to the updated WeatherStationDemo or read through the upgrade guide. -
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Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
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HEALPix
Data Analysis, Simulations and Visualization on the Sphere
...Gorski et al., 2005, Ap.J., 622, p.759 Full software documentation available at https://healpix.sourceforge.io/documentation.php Wiki Pages: https://sourceforge.net/p/healpix/wiki/Home Exchanging Data with HEALPix (in FITS files): https://sourceforge.net/p/healpix/wiki/Exchanging%20Data%20with%20HEALPix/ GDL and FL users should read https://sourceforge.net/p/healpix/wiki/HEALPix%20and%20GDL/ -
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Free DELTA
Software tools for processing taxonomic descriptions in DELTA format
The Free DELTA Project is a free, open-source, software alternative for a generic system to the processing of taxonomic descriptions based on the DELTA (DEscription Language for TAxonomy) format. -
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Armadillo
fast C++ library for linear algebra & scientific computing
* Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads:... -
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DSPSR is a high-performance, object-oriented, digital signal processing library for radio pulsar astronomy. It implements an extensive range of algorithms and features, and can read data from most observatories, instruments, and file formats.
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DNP3 Client Master Simulator download
Simulate DNP3 Client / Master using serial, TCP communication
v21.06.018 Simulate Complete DNP3 Client / Master. using Serial, TCP/IP, UDP communication Add up to 50 Client node in the simulator. Every Client node will work independently. Binary Input, Double-bit Binary Input, Binary Output, Counter Input, Analog Input, Analog output, Octect String, virtual terminal String. support CROB, analog output command with "select-before-operate" or "direct-execute" command execution modes Industry proven, tested with all leading test... -
Go From AI Idea to AI App FastAccess Gemini 3 and 200+ models. Build chatbots, agents, or custom models with built-in monitoring and scaling.
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A simple software to read source file of (.src,.svg)Ovation/WDPF's(Emerson Process Management) Graphics Builder/Control Builder. There are also including some useful Ovation Engineering Tools.
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ecang
Ethercat analyzer. Pcapng (by wireshark) to cvs files converter.
...Ecang extracts the list of the slaves managed and the PDOs exchanged in an ethercat network directly from the network configuration file (ENI file) .xml, thanks to this data it can read numerous information from the file generated by the sniffer (.pcapng) and transfers them to a comma-separated values file (.csv) already applying a first level of validation. -
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...Predefined or self-written plugins operate hierarchically on data provided by other plugins and can also generate new data-streams. An important predefined plugin can read images and videos from disk in various formats, from grabber-hardware, e.g. V4L2-devices or FireWire, and also from external, network wide processes.
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DNP3 protocol Server Simulator download
Simulate DNP3 Outstation server using serial, tcp, udp communication
v21.06.018 Simulate Complete DNP3 RTU Outstation Server. using Serial(RS232, RS485), TCP/IP, UDP communication Add up to 50 server node in the simulator. Every server node will work independently. Binary Input, Double-bit Binary Input, Binary Output, Counter Input, Analog Input, Analog output, Octect String, virtual terminal String. support CROB, analog output command with "select-before-operate" or "direct-execute" command execution modes Industry proven, tested with all... -
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DNP3 Protocol Win Linux test tool code
DNP3 Outstation and client simulator, Source code Library, win, Linux
DNP3 Protocol - v21.06.018 Complete implementation of DNP3 protocol standard including File transfer. Binary Input, Double-bit Binary Input, Binary Output, Counter Input, Analog Input, Analog output, Octect String, virtual terminal String. support CROB, analog output command with "select-before-operate" or "direct-execute" command execution modes Industry proven, tested with all leading test tools. DNP3 Protocol RTU Outstation Server Simulator, Client Master Simulator,... -
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DNP3 Protocol Code Win Linux download
DNP3 Protocol Source code Library Outstation and client Win Linux
v21.06.018 Complete implementation of DNP3 protocol standard including File transfer. Binary Input, Double-bit Binary Input, Binary Output, Counter Input, Analog Input, Analog output, Octect String, virtual terminal String. support CROB, analog output command with "select-before-operate" or "direct-execute" command execution modes Industry proven, tested with all leading test tools Get a free DNP3 (IEEE 1815) Development Bundle In the Development Bundle, We included DNP3... -
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DNP3 Windows c c++ c# .net
DNP3 Source code Library for Windows and simulator
v21.06.018 Complete implementation of DNP3 protocol standard including File transfer. Binary Input, Double-bit Binary Input, Binary Output, Counter Input, Analog Input, Analog output, Octect String, virtual terminal String. support CROB, analog output command with "select-before-operate" or "direct-execute" command execution modes, unsolicited response, Time Synchronization support C C++, C# ( .net ) programming languages Get a free DNP3 Development Bundle In the Development... -
17
DiInSo
DiInSo is orient to solve 3D direct and 2D/3D inverse problems of ERT
'Direct-Inverse Solver' (DiInSo) is an electrical resistivity tomography (ERT) software which orient to solve 3D direct and 2D/3D inverse problems on direct current (DC). X86 version of DiInSo is totally free and can be use in scientific purposes, but it also has not any guarantees, so use DiInSo at your own risk. READ CAREFULLY NEXT IMPORTANT MESSAGE NEVER use BLANKS and try to use only ENGLISH SYMBOLS in directories, filenames, paths and names of problems in program DiInSo. It is highly recommended to install DiInSo in root directory of any logical disk. If you have any error messages at program start, try to install 'Visual C++ Redistributable for VS2015' from Microsoft internet site or from directory 'redist'. ... -
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QtJSBSim
A distributed flight sim and front end for JSBSim
This Qt5 app can send controls data to an instance of JSBSim standalone, and can read and display data from JSBSim. You can think of QtJSBSim as a simulator, with JSBSim as the flight dynamics model back end. For out-the-window visuals you can send data to FlightGear. -
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sRNAWorkbench
The UEA sRNA Workbench
A suite of tools for analysing small RNA (sRNA) data from Next Generation Sequencing devices. Including expression profiling of known mirco RNA (miRNA), identification of novel miRNA in deep-sequencing data and identification of other interesting landmarks within high-throughput genetic data -
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ESP32 BLE Keyboard library
Bluetooth LE Keyboard library for the ESP32
This library allows you to make the ESP32 act as a Bluetooth Keyboard and control what it does. Compatible with Android. Compatible with Windows. Compatible with Linux. Compatible with MacOS X (not stable, some people have issues, doesn't work with old devices). Compatible with iOS (not stable, some people have issues, doesn't work with old devices). There is also Bluetooth-specific information that you can set (optional): Instead of BleKeyboard bleKeyboard; you can do BleKeyboard... -
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NervOn
Open Source EEG project to translate player's mind into a virtual game
NervON is an Open Source project that aims to read and translate human thoughts into a computer. The main objective is to create a virtual world in which millions of people could meet while being totally immersed in this game. -
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Antimony
Antimony is a human-readable, human-writable model definition language
Antimony is a human-readable, human-writable model definition language. libAntimony is a library that will read and write Antimony and SBML files and provides an API for other programs to import Antimony models into their own internal formats. -
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GapFiller
A de novo local assembler for paired reads
GapFiller is a seed-and-extend local assembler to fill the gap within paired reads. It can be used for both DNA and RNA and it has been tested on Illumina data. GapFiller can be used whenever a sequence is to be assembled starting from reads lying on its ends, provided a loose estimate of sequence length. -
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Arduino MIDI Library
MIDI for Arduino
...Compatible with all Arduino boards (and clones with an AVR processor). Simple and fast way to send and receive every kind of MIDI message (including all System messages, SysEx, Clock, etc..). OMNI input reading (read all channels). Software Thru, with message filtering. Callbacks to handle input messages more easily. Last received message is saved until a new one arrives. Overridable template-based settings. Create more than one MIDI interface for mergers/splitters applications. Use any serial port, hardware or software. All USB-related code has been moved into a separate repository Arduino-USB-MIDI, USB MIDI Device support with MIDI USB, still using this library to do all the MIDI heavy-lifting. -
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MoPAC
The Modular Pipeline for the Analysis of CRISPR screens
To facilitate the comparison of gene essentialities in two or more cell samples, we propose MoPAC (Modular Pipeline for Analysis of CRISPR screens), a Shiny-driven interactive tool for differential essentiality analysis in CRISPR/Cas9 screens. For installation and usage instructions please refer to the wiki page.
