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Showing 10 open source projects for "index data"
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RSM
Radiation Spectrum Method : a modal BPM (Beam Propagation Method)
RSM (Radiation Spectrum Method) is a 2D rigorous tool to solve the Maxwell equations for the propagation of light in integrated optics or photonics devices. It makes use of an EigenMode Expansion method (EME) to solve the electromagnetic problem. This software running on Windows and MacOS comes with a GUI that permits to define with the aid of files or scripts the arbitrary and complex geometry of the waveguide. Of that way any waveguide geometry can be handled. Several plots are available... -
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concordia
Powerful search library, best suited for computer-aided translation
...Concordance searcher - tool for translators who need their translations to "agree" with one standard. Concordia is a C++ library for fast text lookup in large corpora. It uses a RAM stored index, which takes up approximately 600MB of memory for a corpus of 2 million sentences. It is based on the idea of a suffix array, enhanced by the presence of other auxiliary data structures. The effects are stunning - Concordia is able to do simple substring lookup at the pace of 5000 queries per second (on personal PC) - a speed which can not be achieved by any other search library. ... -
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libosmscout
Library for OpenStreetMap offline rendering and routing
libosmscout offers applications simple, high-level interfaces to offline rendering and routing functionalities based on OpenStreetMap data. It does so by preprocessing *.osm data files and generating binary data and index files for fast access. -
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x-ballistics
a browser based ballistics calculator for arrows and bullets
Browser based ballistics calculator for arrows and bullets: http://www.x-ballistics.eu/app/web/ballistics/index -
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Kinetic Model Builder
GUI for building, simulating and optimizing kinetic models.
...A series of video tutorials are available at https://www.youtube.com/watch?v=7I2XPkdOvCg&list=PL-J_lULjiFsCPL2pkz8_tFe_aJ4Fc8a8k&index=1. -
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RTToolbox
Library to support quantitative analysis of radiotherapy data
...Dose comparison indices such as Conformity Index (CI), Homogeneity Index (HI) and Conformation Number (CN), and biological models including TCP, NTCP, EUD and BED are determined from dose distributions and DVHs. The RTToolbox can be easily extended to support other data format, comparison indices and -
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MieConScat is a GUI/Console program for generating MIE SCATtering data as a table of cross sections. It can generate scattering cross sections over specified angular ranges and total absorption cross sections. It was initially developed to aid work with optical particle counters (OPC) especially when CONverting data between cross section and diameter space. These methods are described in Rosenberg et al. 2012, Particle sizing calibration with refractive index correction for light scattering optical particle counters and impacts upon PCASP and CDP data collected during the Fennec campaign and CDP data collected during the Fennec campaign, http://www.atmos-meas-tech.net/5/1147/2012/amt-5-1147-2012.html
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olego
OLego – short or long RNA-seq read mapping to discover exon junction
...OLego adopts a seeding and extension scheme, and does not rely on a separate external mapper. It achieves high sensitivity of junction detection by using very small seeds (12-14 nt), efficiently mapped using Burrows-Wheeler transform (BWT) and FM-index. This also makes it particularly sensitive for discovering small exons. It is implemented in C++ with full support of multiple threading, to allow fast processing of large-scale data. -
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LibMIA
Program using an extended Einstein notation with dense or sparse data.
This is currently a prelim version - most of lattice functionality has been completed, Dense multi-index array functionality is progressing well. -
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PPSeq: Parallel NGS Analysis
Parallel Processing for Next-Generation Sequencing (NGS) Analysis
High-throughput next generation sequencing (NGS) technology has quickly emerged as a powerful tool in many aspects of biomedical research. However, along with its rapid development, the data magnitude and analysis complexity for NGS far exceed the capacity and capability of traditional small-scale computing facilities, such as multithreading algorithms on standalone workstations. To address this issue, here we present a solution using the ever-increasing supply of processing power by massive...
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