Showing 188 open source projects for "algorithm"

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  • 1

    Clusterfit

    Show stellar evolution and open clusters in a color-magnitude diagram

    ...In addition, it can show the CMD of a large number of existing open clusters, based on scientific survey data, and overlay isochrones (the curve in a CMD from stars born at the same time) to determine the age, distance and interstellar reddening of the cluster. Determining these parameters can be done automatically with a global search algorithm (more specifically a genetic algorithm). This program requires the installation of the libfgen package, also available on SourceForge.
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  • 2
    ACADO Toolkit

    ACADO Toolkit

    Toolkit for Automatic Control and Dynamic Optimization

    ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface.
    Downloads: 0 This Week
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  • 3
    ParsInsert
    ParsInsert efficiently produces both a phylogenetic tree and taxonomic classification for sequences for microbial community sequence analysis. This is a C++ implementation of the Parsimonious Insertion algorithm.
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  • 4
    EToS (Efficient Technology of Spike sorting; Extracellular recording To Spike trains) is an open-source system for spike sorting. EToS contains the programs of spike detection, feature extraction and clustering.
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  • 5

    DecGPU: CUDA-based Error Correction

    The first distributed and parallel short-read error corrector on GPUs

    DecGPU (Distributed Error correction on GPUs) is a parallel and distributed error correction algorithm for large-scale short read assembly. It is implemented using CUDA C++ and MPI, running on a GPU cluster.
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  • 6

    CvHMM

    Discrete Hidden Markov Models based on OpenCV

    This project (CvHMM) is an implementation of discrete Hidden Markov Models (HMM) based on OpenCV. It is simple to understand and simple to use. The Zip file contains one header for the implementation and one main.cpp file for a demonstration of how it works. Hope it becomes useful for your projects.
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  • 7
    Software for making Clusters of Orthologous Groups (featuring the new EdgeSearch algorithm). Latest ref: Kristensen DM, Kannan L, Coleman MK, Wolf YI, Sorokin A, Koonin EV, Mushegian A. Bioinformatics 2010.
    Downloads: 0 This Week
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  • 8
    SmithWaterman

    SmithWaterman

    Fast local sequence alignment for the masses!

    MOVED TO GITHUB: https://github.com/noporpoise/seq-align An implementation of the Smith-Waterman local sequence alignment algorithm. See our sister project global alignment using Needleman-Wunsch: http://sourceforge.net/projects/needlemanwunsch/
    Downloads: 0 This Week
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  • 9

    matrixclass

    A small and simple cpp template class for manage matrix.

    A cpp class for manage matrix. Support the calculus of the determinant with the Lagrange's algorithm and the Gauss' method. From the revision 11 are avaiable new functions, like crop and cat of matrixes, and the LU decomposition algorithm.
    Downloads: 0 This Week
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  • 10
    This is a MATLAB implementation of inverse compositional Active Appearance Models (AAMs), as described in the "Active Appearance Models Revisited" paper by Iain Matthews and Simon Baker.
    Downloads: 0 This Week
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  • 11
    Syntactic is a simple C++ library for constructing general Neural networks. For now the library supports creation of multi layered networks for the Feedforward Backpropagation algorithm as well as Time Series Networks. More will be implemented soon.
    Downloads: 0 This Week
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  • 12

    CUDA-based Linear Openings

    Fast opening with linear SE on CPU and GPU

    Fast opening with linear SE on CPU and GPU using Bartovsky algorithm. Featuring console example application.
    Downloads: 0 This Week
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  • 13
    BpMatch is an algorithm that, given 2 strings S and T, compute the maximum coverage of T using only subequence or reversed complemented subsequences of S, of minimum length l.
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  • 14
    Implementation of algorithm from paper 'Numerical Approximation of Option Premia in Displaced-Lognormal Heston Models' by A Dickinson. For code: click link under 'Develop' & checkout via svn or click link under Browse Code->SVN & download tarball
    Downloads: 0 This Week
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  • 15
    BIL++
    BIL++ is a set of standalone C++ packages for data processing in Bioinformatics (Graph mining, Bayesian networks, Genetic algorithm, Discretization, Gene expression data analysis, Hypothesis testing).
    Downloads: 0 This Week
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  • 16
    Automatic vehicle counting
    The count of vehicles is a key task in traffic gauging, as it provides information for designing new roads. This software presents an algorithm to detect and track vehicles in real time or from a video file.
    Downloads: 1 This Week
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  • 17

    NeuroBees

    Multi-agent algorithm

    Software tool (NEURON, Python, C++) based on the multi-agent Bee algorithm and aiming at multi-parametric optimization. 2 versions : - Link with NEURON (need download and install NEURON and NEURON-python) - Autonomous, with two types of neurones (Izhikevich and hodgkin huxley)
    Downloads: 0 This Week
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  • 18
    The project is an implement of the GVF snake algorithm implemented purely in C++. The common interface defined in the project may also be applicable for the new variations of the snake algorithm.
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  • 19
    YaSeTo implements a modification of the widely used Sankoff-Algorithm for sequence/structure alignments of RNA sequences. It is suitable for genome-wide ncRNA gene finding, in case the ncRNA exhibits a conserved secondary structure.
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  • 20
    Foad (EKG Processing)
    Foad is an open source software which receive an EKG Signal from scanner, WFDB database or heart sensors. Finding patient disease started by taking Fourier transform (FFT) from input signal and extract a single cycle. Based on some heuristic algorithm the most important feature like P , Q , R , S , T captured and feed to trained neural network. and so the final decision made by CNN library. As mentioned before this software also capable do some image processing on scanned paper to lower the final costs.
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  • 21
    MTMP is a multi-threaded multiple pattern matching algorithm based on the Wu-Manber algorithm.
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  • 22
    The E* algorithm is a path planner for (mobile) robotics. Unlike A*, which constrains movements to graph edges, it produces smooth trajectories by interpolating between edges. Like D*, it supports dynamic replanning after local path cost changes.
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  • 23
    CheMecher is a fully-featured chemical simulator that supports an arbitrary number of reaction steps and chemical species. Uses the Runge-Kutta algorithm for numeric solutions.
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  • 24
    Evolutionary Structural Optimization Package (ESOP) consists of software for viewing, analyzing, and optimizing structures containing beam, truss, and membrane plate elements utilizing OpenGL and the Genetic Algorithm (GA). Created for use in M.S. theses
    Downloads: 0 This Week
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  • 25
    A quick and simple solver for 2x2 equation's system using Gauss-Jordan algorithm. Written in C++.
    Downloads: 0 This Week
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