199 projects for "github-copilot" with 2 filters applied:

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  • 1
    The CML (Configurable Math Library) is a free, open-source C++ vector, matrix, and quaternion math library designed for use in games, graphics, computational geometry, and related applications. Please note: the CML source has moved to GitHub: https://github.com/demianmnave/CML
    Downloads: 0 This Week
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  • 2
    Exreco

    Exreco

    EXperimental REplicator COllider

    The project is moved to GitHub : https://github.com/bekisz/exreco/ Exreco is a agent based platform for the simulation and study of the Darwinian evolutionary process. It aims to support the exploration of genetically rooted phenomena like - aging (programmed cell death) - sexual and asexual reproduction - altruism of individuals - spread of diseases The typical way of using Exreco starts by defining the behavior of your replicators ( agents that can reproduce and evolve over time), and defining the environment of these replicators. ...
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  • 3
    GenomeView
    GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded. This project has moved to GitHub: https://github.com/GenomeView/genomeview
    Downloads: 0 This Week
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  • 4
    *WARNING* gtburst moved to github (https://github.com/giacomov/gtburst). ########################################## gtBurst is a tool to download data, analyze and simulate Gamma-ray Bursts and Solar Flares as observed by the NASA Fermi satellite.
    Downloads: 0 This Week
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  • 5

    libsharp

    Library for spherical harmonic transforms (SHT)

    NOTE: as of April 24, 2015, libsharp development has moved to Github (https://github.com/dagss/libsharp). Libsharp is a collection of algorithms for efficient conversion between maps on the sphere and their spherical harmonic coefficients. It supports a wide range of pixelisations (including HEALPix, GLESP, and ECP). This library is a successor of libpsht (http://sourceforge.net/projects/libpsht).
    Downloads: 0 This Week
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  • 6
    A Linux tool for the MikroElektronika (www.mikroe.com) AVRprog2 programming hardware. We have migrated to Github! https://github.com/avrprog2/avrprog2-code
    Downloads: 0 This Week
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  • 7
    SOAPdenovo-Trans

    SOAPdenovo-Trans

    A de novo transcriptome assembler.

    Latest Codes on GitHub: https://github.com/aquaskyline/SOAPdenovo-Trans SOAPdenovo-Trans is a de novo transcriptome assembler inherited from the SOAPdenovo2 framework, designed for assembling transcriptome with alternative splicing and different expression level. The assembler provides a more comprehensive way to construct the full-length transcript sets compare to SOAPdenovo2.
    Downloads: 0 This Week
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  • 8
    MICA-aligner

    MICA-aligner

    Next-generation sequencing short reads aligner based on Intel® MIC

    Latest Code in GitHub: https://github.com/aquaskyline/MICA-aligner To better utilize MIC-enabled computers for NGS data analysis, we developed a new short-read aligner MICA that is optimized in view of MIC’s limitation and the extra parallelism inside each MIC core. Experiments on aligning 150bp paired-end reads show that MICA using one MIC board is ~4.85 times faster than the CPU-(multi-core)-based BWA-MEM and about the same speed as the GPU-based SOAP3-dp.
    Downloads: 0 This Week
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  • 9
    SOAP3-DP

    SOAP3-DP

    Fast, Accurate and Sensitive GPU-based Short Read Aligner

    Latest Code on GitHub: https://github.com/aquaskyline/SOAP3-dp SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously. Compared with widely adopted aligners including BWA, Bowtie2, SeqAlto, CUSHAW2, GEM and GPU-based aligners BarraCUDA and CUSHAW, SOAP3-dp was found to be two to tens of times faster, while maintaining the highest sensitivity and lowest false discovery rate (FDR) on Illumina reads with different lengths. ...
    Downloads: 0 This Week
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  • 10
    Advanced Normalization Tools ( ANTs )

    Advanced Normalization Tools ( ANTs )

    Multidimensional image registration, segmentation and statistics

    *** This is an archive only, please see https://github.com/ANTsX for this and other ANTsX tools *** Image registration with variable transformations (elastic, diffeomorphic, diffeomorphisms, unbiased) and similarity metrics (landmarks, cross-correlation, mutual information, etc). Image segmentation with priors & nonparametric, multivariate models. *** Current ANTs code, binaries (Mac, Windows, Linux) and support is hosted at Github *** https://github.com/ANTsX/ANTs Docker hub: https://hub.docker.com/u/antsx Older code and binaries remain available here on SourceForge (1.9x, pre 2014). If you are new to ANTs you should probably go to Github and get the latest code.
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    Downloads: 15 This Week
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  • 11
    Mobile Robot Programming Toolkit (MRPT)

    Mobile Robot Programming Toolkit (MRPT)

    **MOVED TO GITHUB** ==> https://github.com/MRPT/mrpt

    **MOVED TO GITHUB** ==> https://github.com/MRPT/mrpt The Mobile Robot Programming Toolkit (MRPT) is an extensive, cross-platform, and open source C++ library aimed for robotics researchers to design and implement algorithms about Localization, SLAM, Navigation, computer vision. http://www.mrpt.org/
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    Downloads: 8 This Week
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  • 12
    Ymap - Yeast Mapping Analysis Pipeline

    Ymap - Yeast Mapping Analysis Pipeline

    Pipeline for large-scale genome changes analysis of genome datasets.

    The active use repository has migrated over to: https://github.com/darrenabbey/ymap The repository here was errantly created with some large binary files included. Attempts to extract the files from the history here have failed. A copy of the history was successfully scrubbed and then hosted at github. -------- Eukaryotic pathogens have complicated and dynamic genomes. To facilitate analysis of copy number variations (CNV), single nucleotide polymorphisms (SNPs), and loss of heterozygosity (LOH) events in Candida albicans, the most common human fungal pathogen, we developed a pipeline for analyzing diverse genome-scale datasets from microarray, deep sequencing, and restriction site associated DNA sequence experiments for clinical and laboratory strains. ...
    Downloads: 0 This Week
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  • 13
    cclib
    IMPORTANT! As of version 1.2, cclib development has moved to github. Please use the flowing pages for up-to-date information about cclib: Repository (source code, tracker) - https://github.com/cclib/cclib Online documentation - http://cclib.github.io/ cclib is an open source library, written in Python, for parsing and interpreting the results of computational chemistry packages. It currently parses output files from ADF, Firefly, GAMESS, GAMESS-UK, Gaussian, Jaguar and ORCA.
    Downloads: 0 This Week
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  • 14
    We've Moved! Please visit us on Github for the latest GPSTk developer updates and binary releases. https://github.com/SGL-UT/GPSTk
    Downloads: 1 This Week
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  • 15

    Raysect Python Raytracing Framework

    A raytracing framework for optical/non-optical physics simulations

    This project has migrated to github: https://github.com/raysect
    Downloads: 0 This Week
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  • 16

    quichem

    Utilities for fast input of chemical formulae and equations.

    *** New releases of quichem will only be available on GitHub. *** quichem is a utility written in pure Python allowing for fast input and parsing of chemical formulae and equations. Entering data does not require any modifier keys or keystrokes to be pressed. This SourceForge page provided pre-built Windows binaries of quichem-pyside. **To run quichem on Mac OS X or Linux**, or with the wxPython front-end, please download the source from quichem's GitHub page at: github.com/spamalot/quichem.
    Downloads: 0 This Week
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  • 17
    GeNN
    ==================================== ***** ATTENTION!!! WE HAVE MOVED!!! ***** You will find all future GeNN updates on GitHub at: https://github.com/genn-team/genn THIS PAGE WILL NO LONGER BE MAINTAINED! ==================================== GeNN is a GPU enhanced Neuronal Network simulation environment based on code generation for NVidia CUDA.
    Downloads: 0 This Week
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  • 18

    matImage

    An image processing and analysis library for Matlab

    ...It contains more than 250 fonctions for image enhancement, filtering, analysis, or visualisation, as well as for creating basic test shapes. It is built as a complement of the Mathworks image processing toolbox (IPT). Project is being transfered to GitHub: http://github.com/dlegland/matImage
    Downloads: 1 This Week
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  • 19
    MatrixUser

    MatrixUser

    A Multi-functional GUI-based Program for Image Processing and Analysis

    The MatrixUser project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MatrixUser/ Most of the medical images (e.g. CT, MRI, PET, etc.) comprises multiple frames which represent slices, phases, timing etc. from the same imaging object. Those images can be saved as multidimensional matrices in Matlab thanks to Matlab's powerful support of multidimensional data representation.
    Downloads: 0 This Week
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  • 20
    Library for creating and analyzing voxel objects. This project has moved to github. https://github.com/jonhiller/Voxelyze
    Downloads: 0 This Week
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  • 21
    Agent.GUI

    Agent.GUI

    The Project moved to github https://github.com/EnFlexIT/AgentWorkbench

    The project has moved to github https://github.com/EnFlexIT/AgentWorkbench Agent.GUI is a simulation framework and toolkit based on the JADE framework. It provides functionalities for time aspects, agent-environment interaction, visualization and load balancing, Furthermore, the included application focuses the usability for end users.
    Downloads: 0 This Week
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  • 22
    YARP - Yet Another Robot Platform
    YARP, Yet Another Robot Platform. Always dreamt of controlling a humanoid robot? ...well, we do that. A C++ library for IPC, vision and control. This project was migrated to GitHub: https://github.com/robotology/yarp
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    Downloads: 25 This Week
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  • 23

    javaGeom

    A geometry library for Java

    ...Provides a general framework for manipulating and creating geometric primitives, computing intersection points between shapes, composing them to create new shapes, and performing some measurements. Important note: the repository has now moved to GitHub: https://github.com/dlegland/javaGeom Please update bookmarks!
    Downloads: 3 This Week
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  • 24
    ...Please take the latest code from 'https://github.com/DIA-NZ/Metadata-Extraction-Tool.git'. The code on source forge will not be updated henceforth as it is moved to github.
    Downloads: 4 This Week
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  • 25
    GNU Rocket is an intuitive new way of controlling missiles. The project has moved to GitHub: http://github.com/rocket/rocket
    Downloads: 0 This Week
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