Showing 1863 open source projects for "assembly source code"

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  • 1
    Timina is a Java web-based application for automation of all steps of a genome sequencing project: submission, assembly and annotation of sequences.
    Downloads: 0 This Week
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  • 2

    Java Dynamic Component Framework

    This is a lightweight java dynamic component framework

    This lightweight dynamic component framework, implemented in Java in a first time uses no code generation at all but uses only contracts. Contracts are expressed using simple software mechanism as interfaces and/or reflection (from middleware to application). A single small jar hosts the code dedicated to data, event and services management over the network, using contracts, reflection and generics. The main goal of the Java Dynamic Component Framework (jdcf) is to simplify the writing...
    Downloads: 0 This Week
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  • 3

    Virtual Sound Level Meter

    Virtual Sound Level Meter for analyzing calibrated sound files

    ...The software implements Fast, Slow, Impulse and LEQ; A, C and Flat Weighting; Ln and Noise Dose analysis; Octave and 1/3 Octave band analysis; high resolution FFT analysis and spectrograms. Band analysis can be made using fast FFT methods or slower, but ANSI standard methods. Source code requires MATLAB + Signal Processing Toolbox. Developed under MATLAB R2010a (but might work with some earlier versions) Executable version does not require MATLAB and runs under Windows XP, Vista, and Windows 7.
    Downloads: 4 This Week
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  • 4
    parFE is fully-parallel high-performance finite element code targeted to the modeling of trabecular bones in humans. It employs scalable multigrid solvers for efficient solutions on massively parallel computers.
    Downloads: 0 This Week
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  • 5

    LuaCalc

    Crossplatform stack calculator with very fast usage.

    Crossplatform calculator based on preprocessor to Lua language (CLua). CLua have a hybrid syntax between C-style and Lua and have some additions like inline condition operator etc. Easy and very fast in use. Helpful for debugging and analysing data. Enjoy! Get code on homepage (bitbucket. Link below) of project or download win exe from here or homepage.
    Downloads: 0 This Week
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  • 6
    MeteoStationNM

    MeteoStationNM

    MeteoStaionNM for weather station WS1080(WH1080) for Linux (Ubuntu).

    ...Next, application creating picture file PNG with picture of widged Application, which is possible upload to WEBPage. The Application is written in C++. For exaple, You can open SOURCE code in Qt Creator (download on a web page NOKIA) and compile for Your OS (Windows, Ubuntu, Kubuntu, Symbian etc...). Application is not tested for Windows!!! Notice: You must set permissions of the USB device in the application USERS AND GROUP on the Ubuntu. User XXX and ROOT is need to be add to ONE group.REBOOT. v1.07 Improvements: New Icons and better algorithms for current weather. ...
    Downloads: 0 This Week
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  • 7
    SEG-Y Zip
    SEG-Y files need special compression because they don't compress well using gzip and the like. The code is cross-platform C++ using nothing else than standard system libraries. This is a spin-off from the OpendTect project (http://opendtect.org).
    Downloads: 1 This Week
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  • 8
    NeedlemanWunsch

    NeedlemanWunsch

    Fast global sequence alignment for the masses!

    MOVED TO GITHUB: https://github.com/noporpoise/seq-align Global optimal sequence alignment using the Needleman-Wunsch algorithm. Aligns DNA, RNA, protein sequence and more! See our sister project local alignment using Smith-Waterman: http://sourceforge.net/projects/smithwaterman/
    Downloads: 0 This Week
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  • 9
    ox_black_rhino

    ox_black_rhino

    black_rhino is a multi-agent simulator for financial network analysis

    This is the outdated code of black_rhino. The new version is maintained and hosted on github. Please see https://github.com/cogeorg/black_rhino
    Downloads: 0 This Week
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  • 10

    Frc Robot Simulator

    A library that allows programs for a NI CRIO to be run on a computer.

    A simulator that allows programs written in Java for a National Instruments CRIO to be run on a local computer by overloading the libraries provided by WPI. Some things we've fixed since 0.1a: Kinect no longer throws an exception upon instantiation, the Watchdog is usable, array elements can now be edited in the gui, and lots of under the hood reimplementation to replace native methods. DISCLAIMER: this is not like the diamond bullet studios simulation, this only simulates how the...
    Downloads: 0 This Week
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  • 11

    GPUmat

    GPUmat is a C/C++ GPU engine for Matlab based on NVIDIA CUDA.

    ...Instructions to compile the source code: You need to download a SVN client and then from command line: svn export http://svn.code.sf.net/p/gpumat/code/trunk ./GPUmat the above command creates a folder ./GPUmat with the source code. Then go to the 'doc' folder, open the GPUmat_Developer_Guide.pdf and check the chapter "Source code compilation"
    Downloads: 0 This Week
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  • 12

    SILENT

    a Scratch Interface for Lego NXT

    SILENT is a Scratch modification that interfaces with LEGO MINDSTORM NXT 2.0 robot. It's based on Scratch 1.4.2, developed in JAVA, Squeak and Bash scripting. It's supported by Linux and Windows XP/7, in which it was tested. It required JAVA>=6. Easy to setup and easy to learn! Please leave your review to help me to improve it!
    Downloads: 0 This Week
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  • 13

    OpenSQUID

    Superconducting QUantum Interference Devices (SQUIDs) control software

    OpenSQUID is a Python framework for the control of SQUID (superconducting quantum interference device) readout electronics. It currently supports the Star Cryoelectronics PCI-1000 electronics with PFL-100 and PFL-102 flux-locked loops. Simultaneous operation of both PFL-100s and PFL-102s from a single PCI-1000 is supported. More features are under development. The software is implemented in Python and aims to be easily integrated with user-defined measurement and control code.
    Downloads: 0 This Week
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  • 14

    denovo_solid_pipeline

    Pipeline for small genome assembly using SOLiD sequencing technology

    denovo_solid_pipeline (DSP) is a semi automated pipeline for short genome assembly using SOLiD sequencing data. The main features of the pipeline are the optimization of the number of read-correction runs and computational resources via dynamic programming. DSP also has the advantage over the currently available pipeline (denovo2) of generating more contigs suitable for further assembly steps, increasing the chances of detecting sequencing errors and/or polymorphic sites.
    Downloads: 0 This Week
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  • 15
    This utility, lingen, implements evolution of native machine code via linear genetic programming. The assembly level code uses a subset of assembly language which manipulates and performs calculations using the floating point unit (FPU) of the CPU.
    Downloads: 0 This Week
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  • 16

    ArduinoPulseGenerator

    Generate pulse trains using an Arduino

    ArduinoPulseGenerator is a simple program for generating pulse sequences using an Arduino. There is an associated GUI that runs on the local computer, or you can simply connect to the Arduino with a serial console (9600 baud) and send it commands. This code has been tested on the ArduinoMega 2560 (timing accuracy ~ ±200 μs) and Arduino Due (timing accuracy ~ ±35 μs); it may work on other Arduino boards but this has not been tested.
    Downloads: 0 This Week
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  • 17
    Open RVC-CAL to HDL (ORC2HDL) is an Eclipse Plugin which uses the Open RVC-CAL Compiler (ORCC) and the openForge HDL Synthesizer. This plugin gives the ability to generate HDL code from a RVC-CAL model.
    Downloads: 0 This Week
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  • 18
    Decision Table Preprocessor

    Decision Table Preprocessor

    Ccide is a Decision Table preprocessor.

    Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other...
    Downloads: 0 This Week
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  • 19

    Java Evolutionary Computation Library

    As of 2012-12-18, this project may now be found at Google Code.

    As of 2012-12-18, this project may now be found at http://http://code.google.com/p/paba JECO is a Evolutionary Computation Library deveoloped in Java. It includes a variety of evolutionary optimization techniques such as genetic algorithm, genetic programming, evolutionary mapping methods, particle swarm optimization, ant colonies, etc.
    Downloads: 0 This Week
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  • 20
    MuPuPriNT

    MuPuPriNT

    A primality/compositeness tester for different types of numbers.

    ...It is basic, yet full-featured, and offers several different testing methods for each type of number. MuPuPriNT is built on the GNU Multiple-Precision (GMP) integer + rational library, and is available for Windows, OS X, and Linux. Source code is available as well, and can be built on any machine with Qt installed. As of version 2.0, MuPuPriNT is built on the cross-platform Qt application framework. There are currently two versions: MuPuPriNT and MuPuPriNT Extended.
    Downloads: 1 This Week
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  • 21
    SunlightLB is an open-source 3d lattice Boltzmann code which can be used to solve a variety of hydrodynamics problems, including passive scalar transport problems.
    Downloads: 0 This Week
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  • 22

    GerbEx

    Software for generating G-code for PCB milling and drilling

    Software for generating G-code for PCB milling and/or drilling from Gerber and Excellon files.
    Downloads: 1 This Week
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  • 23
    ACADO Toolkit

    ACADO Toolkit

    Toolkit for Automatic Control and Dynamic Optimization

    ACADO Toolkit is a software environment and algorithm collection for automatic control and dynamic optimization. It provides a general framework for using a great variety of algorithms for direct optimal control, including model predictive control, state and parameter estimation and robust optimization. ACADO Toolkit is implemented as self-contained C++ code and comes along with user-friendly MATLAB interface. The object-oriented design allows for convenient coupling of existing optimization...
    Downloads: 0 This Week
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  • 24

    Customizable Instruction Set Simulator

    Customizable simulator of virtual CPU with multitasking.

    Project implementing simulator of virtual CPU with additional tools. Application written in C# 4, .Net Framework 4.0 , Visual Studio 2010 Features: - IDE- like environment with MDI interface - Customizable (plug- ins) architecture: instruction sets, directives, registers, additional MDI windows - Own assembler using Intel syntax producing binary programs - Simulation of i386- like CPU operating on multi- level cache and RAM - Simulation of debugger and memory view - Features of...
    Downloads: 0 This Week
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  • 25
    GeneSim is a code generator for dynamic systems: it takes an XML description of the system and produces the code that executes it. The typical usage of GeneSim is to generate simulators of engineering systems.
    Downloads: 0 This Week
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