Search Results for "compiler python linux" - Page 37
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Showing 2292 open source projects for "compiler python linux"
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IMPORTANT: This project has moved to github. https://github.com/esa/pykep There you will find the most uptodate code. the code in these repositories is no longer maintained
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FineSplice
Enhanced splice junction detection and estimation from RNA-Seq data
FineSplice is a Python wrapper to TopHat2 geared towards a reliable identification of expressed exon junctions from RNA-Seq data, at enhanced detection precision with small loss in sensitivity. Following alignment with TopHat2 using known transcript annotations, FineSplice takes as input the resulting BAM file and outputs a confident set of expressed splice junctions with the corresponding read counts. Potential false positives arising from spurious alignments are filtered out via a... -
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caplib
Correct, translate and analyze combinatorial library sequencing data
Originally developped to handle PacBio CCS data for an AAV capsid library. This program will extract, correct, translate and analyze the sequencng data, starting from the CCS fastq file. -
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ActiveFolder
ActiveFolder can be integrated with existed scientific computation.
Welcome to the ActiveFolder project, the open source for management simulataion data and reproducing. ActiveFolder provide data reproduction for comparative study and searching reproduction data, by storing data coupled with provenance information. ActiveFolder is integrated existed grid computing service and cloud services. And also, ActiveFolder can be integrated with existed scientific computation, analysis and visualization software without modification. -
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MYRaf Project
An Easy GUI for IRAF Photometry
The MYRaf is a practicable astronomical image reduction and photometry software and interface for IRAF. For this purpose, MYRaf uses iraf, PyRAF and alipy via great programming language Python and Qt framework. Also MYRaf is a absolutely free software and distributed with GPLv3 license. You can use it without restrictive licenses, make copies for your friends, school or business. -
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"gtdev" is an open source tool which assists the engineer in developing a new gas turbine (1D Thermo- and Aerodynamics). It is created by the student research group "Hummingbird - TUM Gas Turbines" placed at the LFA, TU Munich: http://www.hummingbird.tum.de
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binary Turing Machine
A Turing Machine Simulator
Free binary Turing Machine simulator with a graphical user interface and possibility to save your files. Language : French (no translation available) -
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WISP
Weighted Implementation of Suboptimal Paths (WISP)
UPDATE: LATEST VERSION AT http://git.durrantlab.com//jdurrant/wisp Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. Traditionally, computational efforts have focused on the most optimal path... -
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Bika Open Source LIMS/LIS
Web based laboratory information management system
A web-based LIMS (Laboratory Information Management System) · Built in Plone · Professionally supported · Making waves · bi:ka (Zulu): tell it as it is More information and links to manuals, user forums, support and translations are available at https://www.bikalims.org/support-and-service-provision Bika community: www.bikalims.org Main project sponsor, Bika Lab Systems: www.bikalabs.com Inquiries: lemoene@bikalabs.com -
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PyRadMon
Automated reporting of Geiger Muller counter readings to RadMon.org
...The point is: let us work together as free people to jointly report and track radiation levels around the globe. Information is power--and more importantly, information can save lives. This project is known to work on Raspberry Pi and various Linux distributions. Both PyRadMon and RadMon.org are completely free, though donations are always appreciated. -
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OpenCMISS-Zinc
A Library for Interactive Modelling and Visualisation
The OpenCMISS-Zinc Library (opencmiss.org/zinc), or Zinc, is a software library for building interactive graphical modelling and visualisation applications. Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image... -
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pymatlab
A pythonic interface to MATLAB
This package lets Python users interface and communicate with MATLAB from Python. Pymatlab makes it easier for users to integrate a project with a large MATLAB codebase into python scripts by using MATLAB scripts as a part of the python program. The basic functionality of this package is to send data from Python to MATLAB's workspace to be able to run Matlab function on the data. After processing you retrieve back data to... -
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Galactus
A neutral hydrogen galaxy modeling and fitting tool
Galactus is a new astronomical modeling package. The aim is to model and fit datacubes from radio synthesis telescopes. Galactus is the only HI tool which can predict the HI (self-)absorption. -
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Automatically geocode pictures from your camera and a GPS track log. Following Google code closure the only official webpage is (doc, support, code) : https://github.com/notfrancois/GPicSync
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Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
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AbMining ToolBox
python scripts to analyze antibody libraries
02-14-2014. Hamming distance calculation has been updated. These are python scripts to analyze antibody libraries sequenced by next generation sequencing methods (454, Ion Torrent, MiSeq) as described in D'Angelo et al MAbs. 2014 Jan 1;6(1):160-72. -
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wfProc is going to be a Python module for waveform processing. The module will incude simple operations such as addition, subtraction etc, taking into account the timeline of the waveform, as well as filtering, fft and other more complex operations.
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kubos
A simple modular CAD application
Kubos is a CAD application which is in an early stage of development. A derivative version called Kubos Schript can be used for creating scripted objects. For installation instructions see https://sourceforge.net/p/kubos/wiki/Installation/ -
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Botnet Detectors Comparer
Compares botnet detection methods
Compares botnet detection methods by computing the error metrics by reading the labels on a NetFlow file. The original NetFlow should have a new column for the ground-truth label, and a new column with the prediction label for each botnet detection method. This program computes all the error metrics (TPR, TNR, FPR, FNR, Precision, Accuracy, ErrorRate, FMeasure1, FMeasure2, FMeasure0.5) and output the comparison results. It also ouputs a png plot. The program can compare in a... -
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A free, industrial quality library for simulating articulated rigid body dynamics - for example ground vehicles, legged creatures, and moving objects in VR environments. It's fast, flexible & robust. Built-in collision detection.
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labhamster
simple tracking of laboratory purchases and materials
Note: This project has been migrated to: https://github.com/graik/labhamster Labhamster is a simple Django project for tracking materials and reagants ordered for a scientific laboratory and offers a rudimentary inventory management. For now it is not much more than the out-of-the-box Django admin interface with a pretty standard data model. -
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CDPOPgui
GUI Frontend for CDPOP
CDPOPgui is a GUI Frontend for CDPOP What is CDPOP? CDPOP (Cost Distance POPulations) is a spatially-explicit simulator of gene-flow in complex landscapes to explain observed population responses and provide a foundation for landscape genetics. The program implements individual-based population modeling with Mendelian inheritance on a resistant landscape. Simulation begins with an initial homogeneous population and followed by divergence through time as functions of individual based... -
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allink
Software for data analysis, image processing, simulations, solver.
Collection of utilities based on two basics classes: Matematica and VarData. Matematica) performs math operations on vectors and matrices for smoothing, interpolation, convolution, image processing... VarData) manipulate a structure of points connected by links. Addraw) openGL engine. ElPoly) analyze mechanical properties of polymer and membrane like structures. Addyn) perform molecular dynamics and Monte Carlo simulations and has a solver for 4th oder PDE. Avvis) perform all the... -
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tigreBrowser is a web-based browser for ranking results from R/Bioconductor package tigre and similar tools. It allows easy viewing, sorting and filtering of visualisations of models produced by tigre.
