Search Results for "all-in-one"
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Showing 96 open source projects for "all-in-one"
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Doctor Dok
Doctor Dok is an AI based medical data framework
Store, manage, and understand your medical history in one secure place that only you can access. Built to protect your privacy with full end-to-end encryption. Convert all your Blood Tests, MRI Scans, TK Scans, Visit reports, and Hospital Admission Reports to JSON, safely store in the cloud, and discuss, annotate, and translate them with AI. Doctor Dok is a secure storage, digitization, sharing, and AI discovery platform for all your family and/or folder health data. All health history... -
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Quick DICOM Tag Editor
View and edit DICOM tags (Windows & Mac & Linux)
* General description - View and modify DICOM tags of a single file - View and modify DICOM tags from multiple files - Dump DICOM tags into a text file - Preview images (DICOM pixel data) * Update history - All update history list have been moved to the Wiki page -
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XMedCon
medical image conversion utility
a medical image conversion utility & library; hereby hoping to lower at least one barrier in medical research projects. -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
... or reporting odds ratios) and export to spreadsheets programs like Microsoft Excel or statistics programs like R. OpenVigil 1 operates on raw data, OpenVigil 2 on cleaned data (using drugbank.ca and drugs@FDA), OpenVigilFDA uses the official FDA online API. OpenVigil 2 supports query for ATC codes or certain chemical moieties. Other tools of the OpenVigil project include a calculator for measurements of disproportionality for a 2x2 contingency table and a drugname mapper using RxNorm. -
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Monte Carlo eXtreme (MCX)
Physically accurate and validated GPU ray-tracer
MCX is a GPU-accelerated, general-purpose, physically-accurate and feature-rich 3-D light transport simulator. It is one of the fastest simulators because it can use tens of thousands of GPU threads to simulate photons in parallel. -
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kSNP
kSNP4 does SNP discovery and SNP annotation from whole genomes
..., unassembled reads. Finished and unfinished genomes can be analyzed together, and kSNP can automatically download Genbank files of the finished genomes and incorporate the information in those files into the SNP annotation. No programming skills are required to use kSNP4 Gardner, S.N. and Hall, B.G. 2013. . PLoS ONE, 8(12):e81760.doi:10.1371/journal.pone.0081760 Gardner, S.N., T. Slezak, and B.G. Hall. 2015 Bioinformatics 31: 2877-2878 doi: 10.1093/bioinformatics/btv271 -
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SimThyr
A simulation program for thyroid homeostasis.
SimThyr is a continuous simulation program for the human pituitary-thyroid feedback control system. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients. -
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GrowthRates
Calculate growth rates from microplate reader output
... minutes per well, or 32 hours for a 384 well plate. GrowthRates completely analyzes growth parameters in all 384 wells in under 5 minutes. CGR2 (Compare Growth Rates) is a statistical program specifically designed to assess the results of a growth rate experiment that has been analyzed using the program GrowthRates. The purpose of a statistical analysis is to establish our level of trust in both the data and in the conclusions we draw from that data. Both the GrowthRate and CGR2 packages are -
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illness index
illness_index A Computer Program of a Medical Textbook.
A computer scientist has attempted to program a textbook of British general practice (primary care) medicine, that is, Hodgkin K (1978) "Towards Earlier Diagnosis....", 4th Edition, Churchill Livingstone. If a patient types presenting findings (such as headache, cough), the program prompts the user for expansion/denial of appropriate findings, in order to construct a list of patient findings. The program also calculates a list of likely diseases, which the user can use the web to find out... -
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SDC
SDC facilitates development of dist. systems of medical devices.
... Model for Service-Oriented Point-of-Care Medical Device Communication), and P11073-20701 (IEEE Draft Standard for Service-Oriented Medical Device Exchange Architecture & Protocol Binding). The SDC standard has the goal to meet increasing demand for medical device interoperability in an Integrated Clinical Environment (ICE), see also ASTM F2761-1:2009. OpenSDC is not intended to be used in clinical trials, clinical studies, or in clinical routine. -
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Free Version - Flow Cytometery FCS 2.0 and FCS 3.0 analysis compatible with BD, Coulter/Ortho, and Partec sample files. This implementation is platform independent and uses an apache-tomcat server, and runs all computers (Linux, PC, and Mac).
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BrukerEyes
BrukerEyes is an open-source package for Bruker datasets management
BrukerEyes is a cross-platform open-source package for Bruker datasets management. It helps scientists to explore their datasets easily. This project was supported by: European Union's Horizon 2020 research and innovation program under the Marie Sklodowska-Curie grant agreement No 813120 (INSPiRE-MED) © Institute of Scientific Instruments of the Czech Academy of Sciences. -
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SimPET
A web platform for the MC simulation of realistic brain PET data
.../txusser/simpet (New version pre-alpha) You can also upload your own phantoms to simulate. Currently the platform incorporates MC models for the GE Advance, GE Discovery ST and Siemens mCT. More models are on the way. You can also access all the previously simulated datasets from the dev team to test your quantification pipeline (Files section in this page). This project is an open collaboration between IDIS (www.idisantiago.es), Qubiotech (www.qubiotech.es), and FGUMA (www.fguma.es). -
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Peptide Vaccine Analysis Tool (PVAT) is an optimization software that predicts the best possible peptide stretches in a given protein sequence based on two factors: 1. the surface exposure of the peptide stretches, and 2. their susceptibility to mutation.
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HL7 Inspector
HL7 Inspector is a tool for managing HL7 messages
The HL7 Inspector project has moved to Bitbucket. https://bitbucket.org/crambow/hl7inspector All new releases can be found there. The web-based version can still be found at www.hl7inspector.com -
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NUT Nutrition Software
nutrition software to record and analyze what you eat
nut is nutrition software to record what you eat and analyze your meals for nutrient composition. The emphasis is on personal dietary experimentation to determine the best possible diet. The software uses SQLite for a portable, os-independent application. -
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Pydicom by examples
Basic and intermediate examples of DICOM library with Jupyter
Basic and intermediate examples to read, modify and write DICOM files with Python code using Jupyter - To install Jupyter - https://jupyter.org/install ====== All examples are based on Pydicom. An open source library - https://pydicom.github.io/ -
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DoseInHumanBody
Patient dose from medical X-ray and other sources
... not contain all data required to run, i.e. does not contain GEANT4 libraries and GEANT4 nuclear data (for saving space). It does contain however the X-Ray spectrum data. Read README.txt me inside Build folder for how to fix it. Source code included. Also, available on GitHub: https://github.com/ZiliasTheSaint/DoseInHumanBody.git -
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Vital Sign Simulator
Patient vital sign simulator for medical emergency training purposes
The vital sign simulator simulates a patient monitor and is intended for use in medical emergency training simulations. In combination with a (cheap) cpr-manikin, it offers a low-cost alternative to commercial high-tech patient simulation manikins. It is used with a dual monitor system, one monitor with controls for the operator and one providing the vital signs to the trainees. Heart rate, oxygen saturation, etCO2, respiratory rate, blood pressure and various moving ecg-samples can be set... -
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SleepyHead
Open Source CPAP Research and Review Software
Open-source, cross platform, sleep tracking software with a focus on monitoring CPAP treatment. Please see http://sleepyhead.jedimark.net for official release information and latest downloads. -
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QMinim
A web-based minimisation service
Based on MinimPy (http://sourceforge.net/projects/minimpy/), QMinim is a web-based minimization application, for allocation of subject to different arms of a clinical trial. It is an alternative to randomization, with the advantage of balancing arms of trial with respect to preselected prognostic factors. All aspects of minimization procedure including treatments, factors, minimization protocole, and including a preload can be customized using QMinim. -
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Nutrition Tables
Nutrition Investigator
This Nutrition Software consists of easy modifiable tables of selected food nutrients in one file, helps to make an individual diet. The information in this file was obtained from: Source (or Adapted from, as appropriate): Canadian Nutrient File, Health Canada, 2010 and other sources. This file gives an idea of which nutrient could be more likely found in fair quantities in some product. Use that file as a reference tool. Do not make any diet plans based on this information only... -
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EFO
The Experimental Factor Ontology describing experimental variables
*** Please note this repository is now deprecated as of January 2018. All EFO development and source code has been moved to https://github.com/EBISPOT/efo *** The Experimental Factor Ontology (EFO) available from http://www.ebi.ac.uk/efo is an application focused ontology modeling the experimental factors in ArrayExpress and constructing mappings to multiple existing domain specific ontologies. To submit new terms, features or report bugs please submit a ticket at the following: http... -
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UMLS::Query is an umbrella for projects that create measures of semantic similarity for the biomedical domain. Our current project is UMLS-Interface and UMLS-Similarity. Our JBI-2007 article was based on Semantic-Similarity and Snomed-Interface.
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Elexis Praxisprogramm
An Eclipse RCP program for all aspects of a (Swiss) medical practice
An Eclipse RCP program for all aspects of a medical practice: electronic medical record (EMR), laboratory findings etc., as well as accounting, billing (swiss TARMED-System, other systems to be developped) and other daily work. A fully functional version may be downloaded via http://download.elexis.info/3.1.0. Users may optionally include a demo database to have a playground for experiments. See also http://wiki.elexis.info/Installation_Elexis_3.0_OpenSource Elexis 3.1.0 was released...