Search Results for "gnu/linux" - Page 18
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Showing 821 open source projects for "gnu/linux"
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WM Hyperintensities Segmentation Toolbox
Open Source White Matter Hyperintensities Segmentation Toolbox
Wisconsin White Matter Hyperintensity Segmentation [W2MHS] and Quantification Toolbox is an open source MatLab toolbox designed for detecting and quantifying White Matter Hyperintensities (WMH) in Alzheimer’s and aging related neurological disorders. WMHs arise as bright regions on T2- weighted FLAIR images. They reflect comorbid neural injury or cerebral vascular disease burden. Their precise detection is of interest in Alzheimer’s disease (AD) with regard to its prognosis. Our toolbox... -
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Systems Glycobiology
Glycosylation Network Analysis Toolbox (GNAT)
GNAT is an open source, platform-independent MATLAB based toolbox. It is written in MATLAB and Java. It has been tested in Windows (Windows 7), Linux (Ubuntu), and Mac OS (X Lion) platforms. The original GNAT package (file GNAT.zip) provides functions for reading, writing, manipulation, visualization and simulation of glycan structures and glycosylation reaction networks (citation [1]). The second version of this software (GNATv2beta.zip) upgrades the original GNAT program with additional features that are geared towards incorporating glycan-structure experimental data into the simulation environment. ... -
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mVision library is a set of functions related with computer vision programmed in Matlab. Also include a couple of GUIs for test visually the functions.
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MCTIMME
Microbial Counts Trajectories Infinite Mixture Model Engine
MCTIMME is a nonparametric Bayesian computational framework for analyzing microbial time-series data.The current implementation is in Matlab. -
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LNLS-MML
MML and AT files for LNLS UVX and Sirius Rings - Moved to GitHub
MML and AT files for LNLS UVX and Sirius Rings - Moved to GitHub -
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HMM Speech Recognition in Matlab
A speech recognition system using Matlab/Simulink/Stateflow.
This project provide hidden Markov model speech recognition system by using Matlab/Simulink/Stateflow. -
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KYM is a MATLAB / GNU Octave set of functions that implements a wavelet-based automated procedure of quantification and characterization of biological signals. In particular it has been thought for the analysis of the oscillatory component of cytosolic calcium concentration time course.
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Commodity class to facilitate interaction between MATLAB and Bitplane Imaris via COM or ICE interface.
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LAVA for AFM
Lloyd's Algorithm-based Volumetric Analysis for AFM Images
This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of... -
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Dieses Projekt versucht, aus den Oszillationskurven eines an einer schwingenden Plattform befestigten 3D-Beschleunigungssensors charakteristische Kennwerte zu ermitteln, um die posturale Gleichgewichtsleistung von Patienten quantitativ zu beurteilen.
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ECOC PAK is a C++ Library for the Error Correcting Output Codes classification framework. It supports several coding and decoding strategies as well as several classifiers.
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The NSG Toolbox
A Toolbox for nonstationary Gabor transforms
A small LTFAT compatible MATLAB toolbox for computation of and experimentation with nonstationary Gabor transforms - Efficient analysis and synthesis algorithms - Dictionary generators - Frame-related operators - Dictionary and coefficient plotting - Sliced bandlimited filterbanks -
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Constrained Manipulation Planning Suite
openrave plugins for constrained manipulation
...The planning and inverse kinematics algorithms in this suite are designed for articulated robots like robotic arms and humanoids. CoMPS is implemented in C++ and compiles in linux only. There are also several examples in python and matlab that show how to interface with openrave to use the plugins in CoMPS. It has been tested on all Ubuntu version from the last few years and will probably work with most modern linux distributions. Please see the wiki for installation and examples: https://sourceforge.net/p/comps/wiki/Home/ -
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abc-sde
approximate Bayesian computation for stochastic differential equations
A MATLAB toolbox for approximate Bayesian computation (ABC) in stochastic differential equation models. It performs approximate Bayesian computation for stochastic models having latent dynamics defined by stochastic differential equations (SDEs) and not limited to the "state-space" modelling framework. Both one- and multi-dimensional SDE systems are supported and partially observed systems are easily accommodated. Variance components for the "measurement error" affecting the... -
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Matlab VideoUtils
Matlab Toolbox for reading and writing videos.
Matlab Toolbox to process video files, which consists on a set of classes for reading, writing, correcting light changes and generating gaussian pyramids in real time. This toolbox is designed for Windows x64, Max OS X x64 and Linux x64. Through to use of Ffmpeg, it can reproduce and create videos very fast and also do no require to load the entire video file in memory. In addition the C++ code is already compiled in order to simplify the toolbox installation. In order to stay tuned for updates, you can follow the Matlab VideoUtils on Twitter (@VideoUtils): https://twitter.com/#!... -
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VOC-DPM
Object detection system using deformable part models (DPMs)
The VOC-DPM repository is an implementation of an object detection system built on deformable part models (DPMs) and latent SVM learning, specifically packaged as “voc-release5.” It is the companion code for Ross Girshick’s dissertation, and extends earlier work on discriminatively trained DPMs. The system supports a grammar-based representation for object models, allowing structures such as mixtures and hierarchies to represent parts and whole objects. It implements both latent SVM training... -
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SBEToolbox
Systems Biology and Evolution Toolbox (SBEToolbox).
SBEToolbox (Systems Biology and Evolution Toolbox) is being developed in MATLAB as a menu-driven UI software to determine various statistics of the biological network. Some of its features include (but not limited to) algorithms to create random networks (small-world, ring lattice etc..), deduce clusters in the network (MCL, mCode, clusterOne) etc... ******************************************************************************************************************************** PROJECT... -
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nwhess2freq
Calculates frequencies/modes from an nwchem generated hessian
This is a simple Octave script which calculates the frequencies/normal modes from an nwchem generated hessian matrix. The advantage of having a separate script for this is that you can use the same hessian to calculate frequencies for different isotopic substitutions i.e. you only have to run one nwchem calculation. The script is finished in its current form in the sense that it is feature complete. Feel free to amend, translate, copy, steal etc. See the README in the code repository... -
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Malimpa stands for MAtlab Library for IMage Processing and Analysis. It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox. Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
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GLPKMEX - a Matlab MEX interface for the GLPK library Note: GLPKMEX is not currently compatible with glpk-4.49, or later. please use with glpk 4.40 - 4.48.
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Octclipse
Octave Eclipse GUI
...Supports search, autocompletion, launching scripts, interactive console, debug and integrated plotting on Octave versions 3.2.x, 3.4.x and 3.6.x. The current goal is to make it running out-of-box on multiple platforms. Currently only Linux and Windows are supported. Mac support is possible. The project needs a maintainer for Mac version, since I don't have Mac to build Octclipse and test it on this platform. Also, it is worth to support Eclipse 4.0 Juno with DLTK 4.
