Bugs
SW for HTP analysis of 3D trajectories of microorganisms
Fortran and shell-level programs originally designed for the analysis of quasi-helical trajectories of Toxoplasma gondii through Matrigel media, acquired by 3D microscopy and digitized by Imaris tracking sw, as published in [TBA]. Key sw components include a singular-value-decomposition (SVD) approach to fitting a modified Fourier series to noisy 3D coordinates measured at irregular time intervals (incorporating cross-validation for determining optimum Fourier order); correction...