Search Results for "gnu/linux" - Page 17
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Showing 821 open source projects for "gnu/linux"
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PlaTypUS
Plasmodium Typing Utility Software
The goal of PlaTypUS is to establish a unified Plasmodium whole genome analysis tool, that aligns short read sequences in an agreed upon manner, with many quality control steps, and calls both SNVs and CNVs in a community agreed standard way. We also seek to provide this analysis in a stand-alone graphic user interface so that labs around the world can analyze their own whole genome sequencing data, rather than relying on outside institutes. -
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Geospace Analysis Package
MatLab toolbox for magnetospheric and ionospheric science.
A MatLab toolbox with many simple and useful functions for analyzing data from Cluster, Champ and the Swarm missions. Other functions for space plasma physics, magnetospheric and ionospheric research are included. The toolbox is designed to be as simple as possible. Each function can be learned and used individually. See the tutorial in the Files section for a quick introduction. -
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Matlab Algorithm To C or C++
Matlab Mupad algo demos to C and C++
A demo with Matlab Mupad with an Options Call and Put algos converted to various C and C++ projects. You could also use Simulink for even FPGA deployment via HDL for ultra lowest high frequency trading -
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Software for automated acquisition and analysis of paleomagnetic and rock magnetic data using the RAPID System.
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A MATLAB toolbox for simulating the movement of the iRobot Create. Contains multiple GUIs for creating maps and other input, showing the movement of the Create, and replaying a previously saved session.
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RIPE (Regulatory network Inference from joint Perturbation and Expression data) is a novel three-step method that integrates both perturbation data and steady state gene expression data in order to estimate a regulatory network. The ripe package is written in R, with additional functionality provided by a MATLAB executable file. The executable file uses a runtime engine called the MATLAB Compiler Runtime (MCR). The executable for different architectures is distributed on this site together...
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A Matlab toolbox for calibrating the Kinect Sensor. It provides functions to jointly calibrate the depth sensor with a color camera as well as to generate a depth map for the color image and reproject the points in metric coordinates.
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md-toolbox
MATLAB development tools
Functions and utilities are provided that are frequently used in MATLAB applications: handling of variable input (varargin), database handling, parsing m-files for specific tags It contains also an automated SVN-watcher / build system. -
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OpenNEC is an open-source program based on the NEC2 core. NEC2 is a method-of-moments simulation and analysis tool for antennas and conductive structures such as metal towers. The current goal of the project is to recode the NEC2 core from ForTran into Octave and Matlab for cross platform use as a simulation and analysis tool with the powerful graphics and mathematical capabilities of those programs.
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Visualization and clustering analysis of X-Ray diffraction data from combinatorial thin film libraries.
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pymatlab
A pythonic interface to MATLAB
This package lets Python users interface and communicate with MATLAB from Python. Pymatlab makes it easier for users to integrate a project with a large MATLAB codebase into python scripts by using MATLAB scripts as a part of the python program. The basic functionality of this package is to send data from Python to MATLAB's workspace to be able to run Matlab function on the data. After processing you retrieve back data to... -
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TrackArt
GUI for diffusion simulation and SMT data analysis
TrackArt is a simple MATLAB GUI for single particle tracking data analysis and simulation. -
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Utility to create and use a SRS database for pyroshock. Integrate search function to find the best SRS inside the whole database.
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Acoustic FDTD Solver (AC2D) -- is a software to simulate acoustic wave propagation in two dimensions based on the finite-difference time-domain (FDTD) method.
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SPE Toolbox
MatLab functions for reading WinView/WinSpec .spe files
This toolbox is a collection of MatLab functions for reading WinView/WinSpec files (.spe extension) directly to MatLab. It provides functions for reading full header from file into a structure, reading frames into matrices, and reading pixel values across all frames. You can use these functions to analyse and process experiment data stored in .spe files in MatLab, and to write functions to export .spe files to animated GIFs for use in presentations. Also includes simple MatLab application... -
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FluxModules
Module Computation for Metabolic Networks
Genome Scale Metabolic Networks are complex systems, Modules help to break them down and hence ease understanding and algorithmic complexity. FluxModules is a toolbox with code for module detection and module visualization. -
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A Matlab based project for tracking cell nuclei in 3D space over time from live imaging data. (Sample images and lineage data are available under "Files".)
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Osmotic Pressurization Dynamics
Calculates dynamics of osmosis-based pressure generation using PEG.
This MATLAB script calculates pressure as a function of time inside a submerged membrane-bound compartment containing an aqueous PEG solution as an osmotic driver. It can also be used to calculate a membrane's hydraulic permeability by fitting experimental data. The model used accounts for the dilution effects caused by the compartment's expansion. All of this project's resources can be found in the "Files" section. -
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illustrative_progs
collection of illustrative programs:small games, simulators: C, Matlab
a collection of small and medium-sized simulation programs that I made explicitely for dydactic and/or documentation purposes. Browse the files, don't click on widnload because there are multiple zips!! All are related to rigidbody dynamics used to make vehicle simulators in the simplest way. Other types of programs may figure too: Snake or Tetris in C for showing the C programming style opted for the other, more specific programs. Possibly this is a link for supplying material to some... -
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MATLABStarter
Dynamically creates MATLAB path and updates code repositories
A startup function for MATLAB that dynamically adds MATLAB m files, Java folders and .jar archives in user-defined folders and optionally updates any subversion or git working copies found. -
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IPRiT
Image Processing Ridge Tracker
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Top-down Modulated Pitch Model
An implementation for the Top-Down pitch model by E.Balaguer et al.
MATLAB implementation for the Top-Down Modulated Pitch model proposed by Balaguer-Ballester E., Clark, N., Coath, M., Krumholz, K. and Denham, S. L. in "Understanding Pitch Perception as a Hierarchical Process with Top-Down Modulation", published in "PLOS Computational Biology" in 2009 -
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avimmir
(audio, video, image) Multimedia Multimodal Information Retrieval
audio classification; speaker segmentation; speaker clustering; speaker recognition; spoken document retrieval; image retrieval; video retrieval; etc. -
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Fish4Knowledge Project
Analysis of undersea fish videos
The Fish4knowledge project investigated: information abstraction and storage methods for analyzing undersea video data (from 10E+15 pixels to 10E+12 units of information), machine and human vocabularies for detecting & describing fish, flexible process architectures to process the data and scientific queries and effective specialised user query interfaces. A combination of computer vision, database storage, workflow and human computer interaction methods were used to achieve this. The...
