Showing 2837 open source projects for "data science"

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  • 1
    NeuroJSON

    NeuroJSON

    Scalable, searchable and verifiable neuroimaging data exchange platfor

    Downloads: 3 This Week
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  • 2
    JaxoDraw

    JaxoDraw

    JaxoDraw: Feynman Diagrams made easy!

    JaxoDraw is a tool to generate Feynman diagrams in a mouse click-and-drag fashion. Graphs can be exported to a variety of graphics formats and arbitrary latex code can be used for labels to produce high-quality publishing-style figures.
    Downloads: 30 This Week
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  • 3
    Java Treeview - An Open Source, Extensible Viewer for Microarray Data in the PCL or CDT format
    Downloads: 21 This Week
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  • 4
    BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. Please cite the BRIG paper if BRIG is used to generate figures for publications: NF Alikhan, NK Petty, NL Ben Zakour, SA Beatson (2011) BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons, BMC Genomics, 12:402. PMID: 21824423
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    Downloads: 51 This Week
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  • 5
    AquaTerm is a Mac OS X grahics renderer. It allows command line applications written in ObjC, C, FORTRAN, Lisp, Perl or Python to display vector graphics, text and images using a simple API. Adapters for gnuplot, PGPLOT, and PLplot exists as well.
    Downloads: 4 This Week
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  • 6

    PROPER Optical Propagation Library

    Routines for wavefront propagation in IDL, Matlab, and Python

    NOTICE: PROPER will likely stop being supported at the end of 2026. It will remain available on Sourceforge after that, but there will be no updates or bug fixes. PROPER is a library of routines for the propagation of wavefronts through an optical system using Fourier-based methods. It was developed at the Jet Propulsion Laboratory for modeling stellar coronagraphs, but it can be applied to other optical systems were diffraction propagation is of concern. It is currently available for IDL...
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    Downloads: 184 This Week
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  • 7
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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    Downloads: 30 This Week
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  • 8
    SpectraViever

    SpectraViever

    GUI app to view Veritas, MAX IV data

    Data visualization, generate metadata log files, save spectra in .txt format for further advanced analysis.
    Downloads: 1 This Week
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  • 9
    EChem++ is a software system based on an object oriented approach to electrochemical experimentation, simulation, and data analysis. Currently, development emphasis lies on the modelling and simulation as well as the analysis modules.
    Downloads: 2 This Week
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  • 10

    miRge3

    Comprehensive analysis of small RNA sequencing data

    An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User...
    Downloads: 57 This Week
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  • 11
    QXRD is software for the acquisition and analysis of X-ray data taken with 2 dimensional detectors. The software can drive a Perkin Elmer XRD series flat panel detector and can be remote-controlled via a socket interface, or directly from SPEC
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    Downloads: 12 This Week
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  • 12

    Ising3SpinGlass

    Code and Data accompanying https://arxiv.org/abs/2501.13205

    The provided C-code and the data files were used to produce the research results discussed in the preprint at https://arxiv.org/abs/2501.13205.
    Downloads: 0 This Week
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  • 13
    Armadillo

    Armadillo

    fast C++ library for linear algebra & scientific computing

    * Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads:...
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    Downloads: 3,945 This Week
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  • 14

    Practically Random

    statistical tests & psuedo- random number generators (RNGs, PRNGs)

    Randon number generation & testing. The best suite of statistical tests for fast PRNGs anywhere. Multithreaded for speed, command line tools for automation, no upper limit on data size. Also, a variety of C++ pseudo-random number generators with well designed interfaces aimed at practical uses, not just research.
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    Downloads: 89 This Week
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  • 15
    Biosphere3D

    Biosphere3D

    Interactive landscape rendering based on a virtual globe.

    Biosphere3D targets interactive landscape rendering based on a virtual globe. It supports DEM, satellite and aerial images, 3D models (Collada), 3D plant models, and Shapefiles. Biosphere3D was initially developed by the landscape visualization group of the Zuse Institute Berlin by Malte Clasen and is now developed further by Lenné3D GmbH. For more information about the used concepts have a look at the thesis of Malte Clasen: Towards Interactive Landscape Visualization Doctoral...
    Downloads: 9 This Week
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  • 16
    DSA Bootcamp Java

    DSA Bootcamp Java

    This repository consists of the code samples, assignments, and notes

    ...The repository is organized into multiple modules that start with Java basics and gradually progress toward arrays, recursion, sorting, searching, linked lists, stacks, queues, trees, graphs, dynamic programming, and other advanced topics. It is a popular resource for students preparing for coding interviews, competitive programming, or computer science fundamentals.
    Downloads: 1 This Week
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  • 17
    WxMAP2
    A python-based system to diagnosis and make weather maps (wxmap) of numerical weather prediction models using the Grid Analysis and Display System (GrADS) from opengrads.org
    Downloads: 0 This Week
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  • 18

    TEI LingSIG

    Production space for the TEI Linguistics SIG

    This used to be the experimentation and production space for the Special Interest Group (SIG) of the Text Encoding Initiative (TEI) called "TEI for Linguists", LingSIG for short. Currently, this is a storage place for documents produced by the SIG. Use https://github.com/LingSIG to access the current production space.
    Downloads: 5 This Week
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  • 19
    Ngraph-gtk
    The repository was moved to GitHub https://github.com/htrb/ngraph-gtk User's manual https://htrb.github.io/ngraph-gtk/manual/ Japanese web page https://htrb.github.io/homepage/ngraph/ngraph-gtk.html
    Downloads: 3 This Week
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  • 20

    TabuVis

    An Interactive Visualisation for Tabular Data

    TabuVis is a comprehensive visual analysis tool that provides a flexible, customizable and interactive visualization for tabular (or multidimensional) data. It utilizes scatter-plot visualization approach to provide comprehensive and interactive views for different attribute mappings. It provides single scatter-plot and multiple scatter-plots together with Map (GIS) capability. The project is available at: http://staff.scem.uws.edu.au/~vinh/projects/TabuVis/ Related publications: https://www.sciencedirect.com/science/article/pii/S2468502X20300358 https://dl.acm.org/doi/pdf/10.1145/2968220.2968248 https://link.springer.com/content/pdf/10.1007/s11432-013-4870-1.pdf https://dl.acm.org/doi/pdf/10.1145/2397696.2397705
    Downloads: 0 This Week
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  • 21
    MRCube

    MRCube

    Meta-Model Management based on RDFs Revision Reflection

    MRCube is a graphical editing tool of RDF-based contents developed for managing a relationship between RDF and RDFS contents.
    Downloads: 1 This Week
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  • 22
    UNICORE

    UNICORE

    UNiform Interface to COmputing and data REsources

    UNICORE is a software suite for building federated systems, providing secure and seamless access to heterogeneous resource such as compute clusters and file systems. UNICORE deals with authentication, user mapping and authorization, and provides a comprehensive set of RESTful APIs for HPC access and workflows. Contributors: visit https://github.com/UNICORE-EU
    Downloads: 8 This Week
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  • 23
    xrayutilities

    xrayutilities

    a package with useful scripts for X-ray diffraction physicists

    xrayutilities is a python package used to analyze x-ray diffraction data. It can support with performing diffraction experiments and used for common steps in the data analysis. It can read experimental data from several data formats (spec, edf, xrdml, ...); convert them to reciprocal space for arbitrary goniometer geometries and different detector systems (point, linear as well as area detectors); for further processing the data can be gridded (transformed to a regular grid). More...
    Downloads: 2 This Week
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  • 24
    A small collection of tools for organizing references in scientific work - cooperates with BibTeX.
    Downloads: 0 This Week
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  • 25
    Veritas RIXS Analysis

    Veritas RIXS Analysis

    Advanced data analysis for Veritas beamline at MAX IV

    You can do advanced analysis using the raw data from RIXS .h5 file. It has several tabs using which you can do different types of analysis, thereby utilizing the full potential of the Veritas beamline. Some of the features in addition to standard RIXS data analysis are: - continuous and discrete RIXS maps, - RIXS spectromicroscopy, - radiation damage analysis, - Q calibrations.
    Downloads: 0 This Week
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