Search Results for "data analysis" - Page 64
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Showing 2661 open source projects for "data analysis"
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Iterative Flow Analysis
Iterative Data and Control Flow Analysis
https://github.com/jplevyak/ifa IFA, Iterative Flow Analysis is a combined data-flow and control flow analysis. It is capable of resolving the concrete types (as opposed to the nominal or declared types) and the interprocedural call graph for statically or dynamically typed programs. -
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XNDiff
X-ray and Neutron powder pattern simulation analysis
Keywords (XNDiff): -SAXS -SANS -absolute units -core (double)shell crystalline nanoparticles -with a parallelepidal shape -particle assemblies -powder and ensemble average -C/C++ -Unix -OpenMP -HPC Cluster Keywords (BatchMultiFit): -simultaneous fits for several SAXS and SANS curves with simulation data from XNDiff -SANS data can be smeared with dq values from experimental data sets or analytical functions -Mathematica console -local and global optimizers (simulated... -
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TriageTools
Tools for partitioning and prioritizing fastq data
TriageTools is a collection of tools for partitioning raw data (fastq reads) from high-throughput sequencing projects. The tools are designed for basic data management as well for prioritizing analysis of certain subsets. The project wiki contains usage information. -
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CAPE RNA
Classification based Analysis of Paired Expression data of RNA
CAPE RNA is package of command-line tools for integrated analysis of miRNA-mRNA expression data. miRNA-mRNA interaction states are assigned for each sample independent of a priori known experimental groups. Using these interaction classifications Jaccard-indexes are calculated to evaluate the quality of a predicted interaction based on the distribution of assigned interaction states compared to experimental groups. -
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SNVer is a statistical tool for calling common and rare variants in analysis of pool or individual next-generation sequencing data.
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RDS Surveyor is an RDS/RBDS decoding, monitoring and analysis tool and library. It has migrated to GitHub: https://github.com/ChristopheJacquet/RdsSurveyor/
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Software for automated acquisition and analysis of paleomagnetic and rock magnetic data using the RAPID System.
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SAXS_Analyser
Simplie tool for analysis small angle X-ray data.
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deshang
Software to support deshang research
Deshang research project mainly focus on collecting students' behaviors and using big data technologies to analyze the factors which might make effects on behavior changing and to build strategies set of parents and teacher guiding. This SF project aims to provide interface and backend analysis functionalities for project Deshang. The softwares used are WAMP (Window Apache + MySQL + PHP) with phpMyAdmin (web base MySQL admin console) included, WordPress (3.8.1 chinese version), Sphinx as search engine and libMMSeg chinese directionary for Sphinx. -
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DNAA is the DNA analysis package, for analyzing next-generation post-alignment whole genome resequencing data. Specifically, DNAA is able to find structural variation, SNP and indel variants, as well as evaluating the mapping and data quality.
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BlackLight - XML Viewer
A syntax-removing XML viewer with tree navigation
An XML viewer aimed at making the data easily browse-able. Licensed under GPL v3 Simple Description: https://tldrlegal.com/license/gnu-general-public-license-v3-%28gpl-3%29 Full: https://www.gnu.org/copyleft/gpl.html I developed this for use in reviewing various data files for mechanical engineering analysis software I use. I also use it as an aide when writing XML parsing programs. -
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AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.
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xSonify
Java-based sonification data analysis
xSonify is a Java-based sonification data analysis prototype for displaying science data as sounds, with an emphasis on supporting visually-impaired researchers. Alternatives include Sonification Sandbox <http://sonify.psych.gatech.edu/research/>, MathTrax and Earth Plus <http://prime.jsc.nasa.gov/>, Sonifyer <http://www.sonifyer.org> and SoniPy <http://sourceforge.net/projects/sonipy/>. -
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Seal
A toolkit for distributed processing of HT sequencing data.
Seal is a Hadoop-based distributed short read alignment and analysis toolkit. Currently Seal includes tools for: read demultiplexing, read alignment, duplicate read removal, sorting read mappings, and calculating statistics for empirical base quality recalibration. Seal scales, easily handling TB of data. -
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K-Surfer
A KNIME extension for the management and analysis of FreeSurfer Data
K-Surfer is a novel and unique software plugin for KNIME for the management and analysis of FreeSurfer brain dMRI data. K-Surfer consists of a suite of KNIME nodes that perform several tasks, such as importing diffusion data generated from TRACULA, importing morphological measures obtained from the segmentation and reconstruction of neuroimages and visualising the probability distribution of white matter pathways. -
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OpenI plugin for Pentaho CE provides a simple and clean user interface to visualize data in OLAP cubes. It supports both direct Mondrian and xmla based connections like Microsoft SQL Server Analysis Services (SSAS), plus provides add-on features like Explore Cube Data, custom SQL for drillthrough data, publishing drillthrough data to external web services etc.
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FoodPhysicsApplication
A C# application for scientists in the area of physical chemistry
The project has been created to develop a software that can help scientists in the area of physical chemistry with focus on foods data analysis tools that are currently mainly done by hand. In the first step, advanced analysis of texture analyzer compression data are provided and the project will be extended over time dependent on the time I can get to continue with it. -
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Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
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TrackArt
GUI for diffusion simulation and SMT data analysis
TrackArt is a simple MATLAB GUI for single particle tracking data analysis and simulation. -
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ActiveFolder
ActiveFolder can be integrated with existed scientific computation.
Welcome to the ActiveFolder project, the open source for management simulataion data and reproducing. ActiveFolder provide data reproduction for comparative study and searching reproduction data, by storing data coupled with provenance information. ActiveFolder is integrated existed grid computing service and cloud services. And also, ActiveFolder can be integrated with existed scientific computation, analysis and visualization software without modification. -
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DEEEP
Detector of Integer Vulnerabilities in Software Portability
DEEEP is a open source static analysis tool to detect, in C programs, integer vulnerabilities caused by the bad adaption of aplications from ILP32 to LP64. It uses the tools Lint and Splint, and runs over Open Solaris and Linux operating systems. This tool semantically analyses source code. More precisely, it does type checking, data-flow analysis, and it automatically correlates the results of these two types of analysis. -
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DDMsuite
Derivative Difference Minimization Program
DDM program is designed for crystal structure analysis from powder diffraction data by making use of either Rietveld or Derivative Difference Minimization (DDM) method. In the DDM method the refinement is aimed not at minimizing the absolute difference between the experimental and calculated profiles but at minimizing the oscillations (or curvature) of the difference curve. The squared values of the difference curve derivatives are used in DDM as a measure of the difference curvature. ... -
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The CM Engine translates digital images of rectangular plates that contain gridded colonies into quantitative data. It currently contains 3 analysis modes to ensure accurate measurements no matter how cells are deposited onto the agar.
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DSOL
DSOL: A Distributed Simulation Object Library implemented in Java
DSOL is a full featured multi-formalism, distributed simulation environment developed at Delft University of Technology (The Netherlands). DSOL has support for discrete event and for continuous modeling. Formalisms supported are event scheduling, DEVS, flow-based simulation, and continuous modeling through sets of differential equations. The first release was introduced at IEEE's Winter Simulation Conference in 2002. Since then, numerous papers and PhD dissertations have been developed, with...