Seal is a Hadoop-based distributed short read alignment and analysis toolkit. Currently Seal includes tools for: read demultiplexing, read alignment, duplicate read removal, sorting read mappings, and calculating statistics for empirical base quality recalibration. Seal scales, easily handling TB of data.
Features
- short read alignment (based on BWA)
- duplicate read identification
- sort read mappings
- calculate empirical base quality recalibration tables
- fast, scalable, reliable (runs on Hadoop)
Follow Seal
You Might Also Like
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of Seal!