Search Results for "data mapping" - Page 6
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Showing 826 open source projects for "data mapping"
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Lep-MAP3 is a novel and free software for linkage mapping. It can construct linkage maps on very large number of markers and individuals on single or multiple families. Especially, it supports whole genome sequencing data even with low sequencing depth. If you use Lep-MAP3, please cite P. Rastas. Lep-MAP3: Robust linkage mapping even for low-coverage whole genome sequencing data, Bioinformatics. 2017, 33(23):3726-3732. https://doi.org/10.1093/bioinformatics/btx494. ...
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SAGA - System for Automated Geoscientific Analyses - is a Geographic Information System (GIS) software with immense capabilities for geodata processing and analysis. SAGA is programmed in the object oriented C++ language and supports the implementation of new functions with a very effective Application Programming Interface (API). Functions are organised as modules in framework independent Module Libraries and can be accessed via SAGA’s Graphical User Interface (GUI) or various scripting...
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XCSoar
... the open-source glide computer
XCSoar is a tactical glide computer for Android, Linux, macOS, and Windows. -
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Hibernate
An object relational-mapping (ORM) library for Java
The Hibernate projects offer a suite of powerful Java libraries to work with data. It is best known for Hibernate ORM, which provides relational persistence for Java models and is an implementation of the Jakarta Persistence specification. Hibernate projects do not consistently release binaries or documentation to SourceForge anymore. For up-to-date information, refer to the Hibernate website: * Hibernate ORM: https://hibernate.org/orm/ * Hibernate Validator:... -
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Subread
High-performance read alignment, quantification and mutation discovery
The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon junction detector and featureCounts read summarization program. Subread aligner can be used to align both gDNA-seq and RNA-seq reads. Subjunc aligner was specified designed for the detection of exon-exon junction. For the mapping of RNA-seq reads, Subread performs local alignments and Subjunc performs global alignments. -
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GeoWebCache
GWC is a tile server and caching proxy written in Java
GeoWebCache is a WMS tile cache that lets you serve cached map data to WMS clients, Goole Earth, Google Maps and MS Virtual Earth. The system is pluggable on both ends and does automatic matching to the best available tile. It is very fast and scalable. -
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relax
Molecular dynamics by NMR data analysis
The software package 'relax' is designed for the study of molecular dynamics through the analysis of experimental NMR data. Organic molecules, proteins, RNA, DNA, sugars, and other biomolecules are all supported. It supports exponential curve fitting for the calculation of the R1 and R2 relaxation rates, calculation of the NOE, reduced spectral density mapping, the Lipari and Szabo model-free analysis, study of domain motions via the N-state model and frame order dynamics theories using anisotropic NMR parameters such as RDCs and PCSs, the investigation of stereochemistry in dynamic ensembles, and the analysis of relaxation dispersion data. -
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MensorGIS
Open Source Desktop GIS with Surveying and Cartography Functionality
Open Source Desktop GIS with Surveying and Cartography Functionality. Should be seen as a Learn-GIS with basic Algorithms and Functionality in VB.NET and C#.NET without usage of Software Libraries: CAD/GIS Data (DXF, ShapeFile, GML2, GPX, KML, CSV), Data Schema, Query, Analysis, Topology, Contours, Ortho-Image Registration, Least Squares Adjustment. Also world-wide Geodata of Countries and POIs are available. A companion Scriptum gives explanation about the Theory behind MensorGIS. -
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GeoDMA
Geographic feature extraction and data mining
GeoDMA is a plugin for TerraView software, used for geographical data mining. With a single image, the user can perform segmentation, attributes extraction, normalization and classification. -
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mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
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a R package. 'Qair' gives access to data bases used by air quality monitoring associations in France. It also contains functions to manipualte air quality datas.
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OSGeoLive
Bootable linux distro for Geospatial Applications
OSGeoLive is a self-contained bootable DVD, USB thumb drive or Virtual Machine based on Lubuntu that allows you to try a wide variety of open source geospatial software without installing anything. It is composed entirely of free software, allowing it to be freely distributed, duplicated and passed around. It provides pre-configured applications for a range of geospatial use cases, including storage, publishing, viewing, analysis and manipulation of data. It also contains sample datasets... -
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Analyze and visualize tours in many variations, which are recorded with a GPS device, bike-, exercise- or ergometer-computer. Some highlights: Tools are available to adjust recorded data, GPS tours can be visualized in customizable maps, ...
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treeminder
a free mind mapping tool, to especially assist decision making
I've been trying to develop an idea of a project, but the wide range of possibilities with all their outcomes, cons and pros and whatnot got my mind overloaded. There was no way I could keep or process that much information with my bare mind. So, I've checked the mind mapping tools available in the market, both free and commercial ones, yet they were either clunky or overkilling for my needs. Thus, I've made my own thing, and decided to share it with everyone who might find it useful for... -
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Think Python 2
LaTeX source and supporting code for Think Python, 2nd edition
ThinkPython2 is the repository for the second edition of Allen Downey’s Think Python textbook, which teaches programming fundamentals in Python to beginners. The code includes all of the example programs, exercises, and supplementary files referenced in the book, allowing learners to run the examples, experiment, and extend them. The repository contains clean, well-commented Python scripts that are easy to follow and map directly to chapters of the text, covering topics like variables,... -
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OpenJUMP is a community driven fork of JUMP the "Java Unified Mapping Platform" GIS software. The original JUMP was developed by Vivid Solutions, released under GPL2 in 2003 and discontinued in 2006. During 2004 already some enthusiastic developers joined together to enhance further the features of JUMP. They launched an independent development branch called OpenJUMP. The name gives credit to the original JUMP development, and at the same time describes the objectives of this project to...
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A free viewer of matrix data (e.g. PIXE, RBS,PIGE, XRF mapping) developped with Labview. compatible input format: output files of the batch Fitting from PyMCA software (.dat) or saved image in EDF format (.edf) (PyMCA & AGLAEMap)
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SheetAtlas
Search and compare data across multiple Excel files instantly
SheetAtlas is a free, cross-platform tool for searching and comparing multiple Excel files as a unified database. 100% offline — your data never leaves your computer. KEY FEATURES Unified Search Load unlimited files (.xlsx, .xls, .csv) and search across all sheets with regex support. Row Comparison Compare rows from different files with intelligent column mapping and visual diff highlighting. Data Export Export to Excel or CSV with column filtering, semantic names, data regions support and preserved formatting. ... -
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myGPS Arduino Nano DIY
Build your own GPS unit
To develop an Arduino Nano based GPS module that is low cost, portable and can be used in Astronomy. (c) Copyright Robert Brown 2014-2024. All Rights Reserved. Permission is granted for personal and Academic use only. Code or portions of code may not be copied or used without appropriate credit given to author. -
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pfstools - a set of programs for reading, writing, manipulating and viewing high-dynamic range (HDR) images and video frames. pfscalibration - photometric calibration of cameras and HDR images from multiple exposures. pfstmo - tone mapping operators.
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REL
Modern ORM for Golang
REL is a modern and lightweight ORM for Go that emphasizes testability, flexibility, and composability. It supports a repository pattern and expressive query building with support for advanced SQL features. REL aims to make it easier to write maintainable, testable, and readable database logic in idiomatic Go. -
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BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. Please cite the BRIG paper if BRIG is used to generate figures for publications: NF Alikhan, NK Petty, NL Ben Zakour, SA Beatson (2011) BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons, BMC Genomics, 12:402. PMID: 21824423
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Croizat
A software package for quantitative analysis in Panbiogeography
Croizat is a free, user-friendly, cross-platform desktop software package which biologists can use to integrate and analyze spatial data on species or other taxa and to explore geographical patterns in diversity under a panbiogeographic and graph-theoretic approach. -
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LAnd Survey Tools "LAST" was created to preserve and expand on the work invested in an old, privately used, DOS based land survey construction and data collection application by porting much of the C++ coded logic and design concept over to Python.
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xsd2pgschema
Relational database replication tool based on XML Schema
xsd2pgschema is a Java application suite, which converts XML Schema 1.1 (hierarchical data model) to PostgreSQL DDL (relational data model) and supports XML data migration into PostgreSQL based on the XML Schema without defects on information content. It also supports full-text indexing via either Apache Lucene or Sphinx Search utilizing the relational data model. File conversion from XML to CSV, TSV, or JSON is possible as well as mapping XML Schema to JSON Schema. ...
