Search Results for "simulations" - Page 16
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Showing 583 open source projects for "simulations"
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SPSens
Stochastic parameter sensitivity analysis for chemical networks
SPSens is a complete software package written in C that estimates parameter sensitivities for stochastic models of chemical and biochemical reaction networks using Monte Carlo (MC) stochastic simulations. It is possible to estimate sensitivities with respect to system parameters using the following algorithms: finite difference methods (crude monte carlo, common reaction path, coupled finite differences); likelihood ratio methods; and regularized pathwise derivatives. Additionally the package includes basic stochastic simulation algorithms. ... -
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Simple framework for building scenario based simulations. Build in Java. Simply extend event and state classes and utilize the scenario scripting in XML.
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The goal for libsspt is to provide common glue-type C++ data structures, numerical routines, and graphical abstractions needed when writing simulations
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PixelLight
PixelLight is a cross-platform application framework
PixelLight is a cross-platform application framework for any kind of 3D applications like games, interactive simulations or visualizations. It's written in C++ and has been designed with flexibility and extensibility as one of it's main goals. -
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(AB)² Simulation
Simulation for Physics / Bilogics Systems
Supports flow Simulation for Physics and Meso-Compartimental Simulations for Biological Systems. Uses a Container-Flow based System. -
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VAST is a P2P network library that supports virtual environment applications such as Massively Multiplayer Online Games (MMOG) or large-scale simulations. It is scalable to millions of nodes, bandwidth-efficient, and simple to use.
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MultiKin
General Stochastic Simulation GUI for MultiKin
The GUI allows the creation of nc-files from a GUI run on matlab. These nc-files can then be used with the Hy3S supercomputer fortran code to run chemical kinetic simulations. netcdf and matlab are required. -
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Kast Framework
Python framework for kinematic analysis based on screw theory
...Is it implemented in Python, using numpy, networkx and elementtree, among other packages. The framework was designed to support my research thesis in underwater robotics. The project also contains a framework to implement underwater intervention simulations. -
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Xaver is a software platform base on C++ language for develop graphics applications such as games, simulations, image processing and various other. Environment is based on a modular architecture and object-design. Wrap the OpenGL function for high-level programming.
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Lagrange_Motocross
2D motorcycle simulator done using Lagrangian equations of motion
2D simulation game using exlusively Lagrangian equations of motion. It's a 2D motocross game similar to X-Moto, ActionSupercross and such. Some stability issues persist but mostly it's good already. I shall compile it soon for Windows: one of the problems is that Windows compilers must periodically be reinstalled, and that's annoying. Using Lagrangians in games is not a well documented thing, but it allows to achieve exellent results in very little time, soon after a good parametrization... -
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GameTel Simple LMS
Simple LMS to work with PoEML database, serious games and much more...
Game•Tel is an open source software system that supports personalized learning, focusing on serious games and simulations, making these and traditional content accessible and adaptive to the student and educational context. In this paper we discuss about its design and functionalities, its modular architecture and the multi-environment approach. It needs to work with an oracle database accessed through the PoEML engine web services. A serious games repository has also been integrated and need to be installed separatelly. ... -
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QDC (quick direct-method controlled) is an optimized exact implementation of the Gillespie's direct-method. It is designed for biochemical simulations when there is the need of dynamic parameters whose values can change during the simulation.
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The Multiscale Coupling Library and Environment (MUSCLE) is a platform independent agent system to couple multiscale simulations. MUSCLE provides the software framework to build simulations according to the complex automata theory.
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Grapple
GRAPPLE-Generic Responsive Adaptive Personalized Learning Environment
...GRAPPLE includes authoring tools that enable educators to provide adaptive learning material to the learners, including adaptive interactive components (visualizations, simulations, virtual reality). Authoring includes creating or importing content, assigning or extracting meaning from that content, designing learning activities and defining pedagogical properties of and adaptation strategies for the content and activities. -
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Protein Stability
VIRTUAL QUANTIFICATION OF PROTEIN STABILITY
Protein stability, the most important aspect of molecular dynamics and simulations, requires sophisticated instrumentations of molecular biology to analyze its kinetic and thermodynamic background. Sequence- and structure-based programs on protein stability exist which relies only on single point mutations and sequence optimality. The energy distribution conferred by each amino acid essentially paves way for understanding protein stability. -
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...GenLab creates a software user-friendly environment, which makes users to make a large number of protein, DNA, and RNA sequence analysis and excellent graphical viewing. It also provides powerful environment for simulations of Protein 3D molecular models. GenLab typically provides: •User-friendly graphical tools used for finding and working with relevant regions of DNA, RNA, and protein sequences. •Full integration of data input, data management, calculation results. This eliminates time spent on manual data transfers between different programs and databases. ...
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Pyanpha
A python program to use multiwavelength anomalous surface diffraction
...It enables one to calculate the phases of the structure factors of crystal truncation rods when anomalous scatterers are present in the thin film. Functionality extends to standalone simulations. It was coined pyanpha which is an acronym for PYthon ANomalous PHAsing and it is written in python. -
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IPSA - Inventor Physics Simulation API
Easy to use physics simulation combining ODE with OpenInventor.
Create phyiscal simulations easily through IPSA which combines the OpenInventor 3D API with the Open Dynamics Engine (ODE). Scenes are read from .iv files and simulated in the supplied viewer applications. Find it at: http://ipsa.sourceforge.net -
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NaruGo is game AI project. Current targets are GO board game and Texas Holdem poker. It investigates Genetic programming to build game AI logic. Also EA/GP simulations for TSP, Graph layout and Prisoners Dilemma problem.
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SFish
Basic real-time simulation engine in C++
In SFish you can model simulation objects with attributes and behaviour (continuous over time and not-continuous over time, latter one being events) and the communication between objects; then you can run simulations (real-/non-real-time) given a set of objects with specific attributes and see what happens in cause of their behaviour. -
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SMMP (Simple Molecular Mechanics for Proteins) is a program library for protein simulations with an emphasis on advanced Monte Carlo algorithms. It includes various force fields to calculate the energy of a protein and protein-protein interactions.
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Tina's Random Number Generator Library (TRNG) is a state of the art C++ pseudo-random number generator library for sequential and parallel Monte Carlo simulations.
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Simon is a C++ library for physically plausible dynamics simulations. Its features include collision resolution with resting contact, friction, articulated joints and spring connections for rigid bodies and particles.
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Statistical Thermodynamics Book Codes
Source codes for statistical thermodynamics and stochastic kinetics
The codes for conducting simple molecular simulations are available, as described in the textbook "Statistical Thermodynamics and Stochastic Kinetics. An Introduction for Engineers".
