Search Results for "bed"

123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC...

HIGH-THROUGHPUT TABULAR DATA PROCESSOR (HTDP) is Java application that is intended to facilitate data exploration and reduction tasks in large text files resulting from high throughput technologies, e.g. massively parallel sequencing or microarrays. The software has been optimized for microarray and deep parallel sequencing data, however it can accept any character delimited tabular data sets. HTDP can also import, process and convert Variant Call Format (VCF) files ver. 4.0, 4.1 and 4.2...

Remote-Player is an open source music player, which allows you to listen to music and control the playback while laying on your bed. It has a remote control - (Remote Player Android App). Connection between the computer and and the android app is via wi-fi. App's functions: display title of current playing song; play/stop; play, next, previous song; change volume; change playing offset; If you have any ideas what can I do to make the app better, please share with me and I'll make...

The OWASP Security Shepherd project enables users to learn or to improve upon existing manual penetration testing skills. Utilizing the OWASP top ten as a challenge test bed, common security vulnerabilities can be explored and their impact on a system understood. The by-product of this challenge game is the acquired skill to harden a player's own environment from OWASP top ten security risks. The modules have been crafted to provide not only a challenge for a security novice, but security...

PLEASE NOTE: THIS PROJECT PAGE WILL NO LONGER BE UPDATED - PLEASE USE THE GITHUB PAGE (https://github.com/gantzgraf/autoprimer3) TO FIND THE LATEST RELEASE (https://github.com/gantzgraf/autoprimer3/releases/latest). AutoPrimer3 retrieves gene information, DNA sequences and SNP information from the UCSC genome browser and uses primer3 to automatically design primers to genes or genomic coordinate targets. Primers may be designed using information from any of the UCSC hosted genomes...

StoryTeller has been written for those who like to listen to a book or some music when going to bed. Thanks to its auto-rewind feature you'll never miss a part of your book as StoryTeller will simply rewind to the last point you successfully indicated you were still awake, at least to a certain degree. When StoryTeller beeps that means you have to shake the hell out of your phone to signify you are still, more or less actively, listening. Doing so successfully will reset the timer...

This project assists you in performing population genetic analyses by taking over the ugly, boring and error-prone data manipulation steps. Starting from well specified input formats VCF, BED and FASTA and a unique configuration file describing data (f.e. from SNP-arrays or sequencing) as well as filtering one can create standard POPGEN formats like Eigenstrat, PEDMAP (PLINK), Treemix ... In addition there are several utilities for * generating VCF from SNPArray data (NCBI - GEO, Illumina...

It is a framework for testing various revisitation algorithms on real datasets. Some algorithms have already been implemented and are available for testing. Additional algorithms can be added by users and evaluated on this test bed.

iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/). iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers. For more details about iPiG and it's functionallity, please...

Clean Shutdown is a simple and straightforward auto-shutdown application. It has only one parameter - number of minutes until shutdown and two buttons - OK and Cancel. Pretty much a basic application that should fulfill the basic need of shutting down a computer without getting out of the bed.

This project aims to create an administration console for managing booking for small entities like bed and breakfast

CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74

Castadiva is a test bed based on low-cost off-the-shelf devices, which is used to test protocols developed for MANETs. Castadiva is completely compatible with the file format used by the ns-2 simulator.

An open source research test bed for investigating decision-making in groups comprising people, computers and a mix of these two.

Ever been in bed, watching a DVD and too tired to shut your computer down when it finishes? You NEED this program! SuperAwesomeTimer 2000 can shutdown, restart or execute any command after a countdown or at a specific time.

Cervantes (Certificate Validation Test-bed) is a client/server project that has been developed to test, develop and evaluate certificate revocation systems.

This is a java remake of the classical Lode Runner game. In addition, the project intends to be a test-bed for various game AI and mobile agents techniques.

GPS is the first one Android App who geolocalise your futur bed partner ;)

Guest Reservation software for hotels/motels/Bed and breakfasts.

An open source project to create a large scale wireless (frottle/openwrt), networking (ospf/bgp), IPTV (videoland/myth), VoIP (asterisk/freeswitch) test bed. We are primarily focused on the Southern California area.

WebApp to start or stop remotely the computer's fan using HTTP (your computer's Firefox or your iPhone Safari...). Why do you want to do that? It's too impressive to stop the fan from your bed... :)