Search Results for "linux programs" - Page 5
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Showing 510 open source projects for "linux programs"
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drgarbagetools
Open source tools for control flow analysis of java programs
Dr. Garbage Tools Project is a set of open source tools for control flow analysis of java programs, including Java Sourcecode Visualizer, Bytecode Visualizer and Control Flow Factory for generation and visualization of the various Control Flow Graphs. The tools are the result of a research project on the University of Oldenburg and have been developed by the Dr. Garbage Ltd. & Co KG. -
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OpenAutonomy Demos
Demo code for use with OpenAutonomy
A grab-bag of demo programs and stand-alone tools meant to be connected to an OpenAutonomy identity via pre-trusted authentication tokens. -
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ChkSem
A static source code analyser for Fortran 90 and C++
ChkSem is a static Fortran 90 and C++ source code analyser. Fortran codes are analysed to find potential problems and dead code. This project allows ( for the moment ) to find useless includes and to find missing direct includes for helping programmers to clean C++ codes. This can potentially reduce building time from small programs to huge solutions. This tool is not finalized and new versions will follow, with a GUI with even more features. The project is written in Java to... -
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The Protein Similarity Network
Human protein similarity network used to predict drug safety.
This is the protein similarity network - PSIN. Here, the nodes are human proteins and they are linked only if they share considerable sequence similarity. We found that this network is particularly useful to distinguish approved from problematic drug-targets. Here you also find the complete set of programs and datasets we used for this purpose. Free to help further test and develop this project. Your help and expertise are much appreciated ! If you have any questions, please do... -
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Korat2015
Enhanced Korat supports GUI, FSM, JUNG and JSON.
Korat is a tool for constraint-based generation of structurally complex test inputs for Java programs. Please see http://korat.sourceforge.net/index.html for more information on the Korat application. Korat 2015 includes the below enhancements to Korat: - Graphical User Interface using Java Swing - Graph Output Format using JUNG (Java Universal Network/Graph Framework) - Finite State Machine Domain - Graph Archival using JSON (JavaScript Object Notation) The Wiki page has... -
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Cpt Kirk
Obtain why and why-not justifications for answer set programs.
Since the method proposed in https://www.researchgate.net/publication/262599199_Unifying_Provenance_and_Debugging_for_Answer-Set_Programs?ev=prf_pub is based on meta-programming, it is possible to use existing state-of-the-art software systems that support well-founded and answer-set semantics, which allowed us to start developing this new tool by extending the one that exists related to a debugging approach: Spock, hence the name Cpt. Kirk. Furthermore and more importantly, one direction... -
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Protein Contact Matrix Generator
Command line application to generate contact matrix from proteins (3D)
A protein contact matrix is 2D representation of the distances between amino acid residues in a 3D protein structure. Protein Contact Map Generator (PCMGen) is a command line tool which takes protein 3D structures (PDB format files) as input and computes contact distances between two chains (from single or two different proteins). These matrix files can be further visualised as Contact Maps using other visualization tools/ programs (like R-heatmaps). Contact Maps can be used to understand... -
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AhnConvert
Converts .ahn files into comma-separated .txt and GEDCOM 5.5.1 files
This converter bridges from the .ahn file format into GEDCOM 5.5.1, It's a command-line tool written in Java. AhnConvert allows family data, laboriously grabbed decades ago surviving into state-of-the art genealogy software products. The software "Familien Chronik" by Reiner W. Dudde was a genealogy software published by Data Becker as part of the "Goldene Serie" series, back in the 1990's. Especially in Germany this tool penetrated the market to some extent. Generating a project and... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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JBerd
Java tools for decoding and manipulating BER encoded ASN.1 Files
A simple Java ASN BER decoder and profiler A tool for easy manipulation of BER encoded files. An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler. A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER... -
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XLogo4Schools
A Logo interpreter and programming environment specialized for schools
A Logo interpreter and programming environment specialized for schools. It is a revised version of XLogo, published on http://xlogo.tuxfamily.org/. The Logo dialect is almost the same as Xlogo's, but some Logo commands were reimplemented to fit with the new programming environment and workspace. Some commands which were buggy in the original XLogo have been fixed. The interpreter works now more efficient due to the usage of more suitable data structures. The output of turtle graphics... -
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Alliance HD is a sound converter and organizer for Alesis Fusion 6HD/8HD workstations. It allows to convert WAV files to AFS files and organize programs, samples, multisamples, etc. updating references between them.
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Password Manager - Manage your passwords and private information in one secure application for web sites, computers, programs. Search, add, edit, delete, print, etc. Java app, runs everywhere. Uses SunJCE crypto.
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RudisJavaLib
Application framework.
This library is intended as an application framework. It should ease the creation of classic desktop programs with support for multiple languages, a help- and setup system, file handling and more. -
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Intelligent Keyword Miner
Intelligent SEO keyword miner and predicing tool
THIS IS A NETBEANS 8.02 PROJECT ENGLISH ONLY This program was made to help me with the patent research. It simply generates the search keywords, based on your upvotes or a downvotes of the input parameters. It can accept a text or URL (text takes a prescedence over the URL). If you input URL, it goes to a page, and learns its text from HTML format. This program is intelligent as it predicts what you may want to search next, based on your personal trends. After searching the... -
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Kloxo
Kloxo Web Hosting Panel
Kloxo (formerly known as Lxadmin) is a free, opensource web hosting control panel for the Red Hat and CentOS Linux distributions. Kloxo allows the host administrators to run a combination of lighttpd or Apache with djbdns or BIND, and provides a graphical interface to switch between these programs without losing data. Kloxo Enterprise can transparently move web/mail/dns from one server running Apache to another running lighttpd. -
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Java Vulnerable Lab - Pentesting Lab
a deliberately vulnerable Web application
This is Vulnerable Web Application developed for course by Cyber Security and Privacy Foundation (www.cysecurity.org) for Java programmers The full course on Hacking and Securing Web Java Programs is available in https://www.udemy.com/hacking-securing-java-web-programming/ WAR file: ---------- https://sourceforge.net/projects/javavulnerablelab/files/latest/JavaVulnerableLab.war/download Virtualbox VM... -
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Acheron is a Common Lisp (CL) to JavaScript (JS) compiler. Programs are written in a subset of CL and after compilation executed in a webbrowser. Acheron has native functions that are written in JS and are the bridge between CL and JS.
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argument
Command line argument parser library for Java
Moved to GitHub https://github.com/fedups Command-line argument compiler and parser. With just two lines of code you can start to set up a command-line interface to your Java programs. Many advanced features including "required", "positional", "multiple", and the most advanced - "group" -
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ALTER is a web-based tool to transform between multiple sequence alignment formats. ALTER focuses on the specifications of mainstream alignment and analysis programs rather than on the conversion among more or less specific formats.
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jdbacl stands for 'Java DataBase ACcess Layer' and provides utilities for accessing JDBC databases from Java programs, retrieving meta information in an object model and querying database data.
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cmd-config
Command Line Argument Parsing Library
CmdConfig aims to provide lightweight command line argument parsing for Java programs, beginning with single-character option parsing and adding more advanced features in the future. -
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Plaggie1.1
Plaggie is a standalone open source plagiarism detection application
Plaggie is an standalone open source plagiarism detection application for Java programs. The original authors are Aleksi Ahtiainen and Mikko Rahikainen. The original version can be downloaded from the website: http://www.cs.hut.fi/Software/Plaggie/ We at Maynooth University have updated the original version with following changes. 1) Grouping of students with similar submission 2) Color coding matches of code for easy detection 3) Finding groups of cheaters. This modified version... -
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ZUpdater
Java based software auto updater
This utility included inside larger programs which are designed to be updated. It allows the user of yhe main program to check if a newer version is available. If it is the user has three options: - ignore the update and close the updater frame; - manually manage the update, the utility will open a new window in the user browser at the address of the software download; - automatically update the software, the utility will donload the software updater. If the updater is a zip file its...
