Search Results for "data collection algorithm" - Page 4
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Showing 294 open source projects for "data collection algorithm"
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Genetic Oversampling Weka Plugin
A Weka Plugin that uses a Genetic Algorithm for Data Oversampling
Weka genetic algorithm filter plugin to generate synthetic instances. This Weka Plugin implementation uses a Genetic Algorithm to create new synthetic instances to solve the imbalanced dataset problem. See my master thesis available for download, for further details. -
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JavacTo
Translate java source into another language
JavacTo is a prototype tool designed to evaluate the need and value of translating java code into another programming language. An ideal language for translation is a language that supports the concept of packages, classes, interfaces, and enums as well as built-in memory garbage collection. Languages such as C# and D, are well suited as a translation “To” language. Eclipse project provided to get started. Three visitor classes provided to learn how to use JavacTo and write visitor... -
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OWL Machine Learning
Machine learning algorithm using OWL
Feature construction and selection are two key factors in the field of Machine Learning (ML). Usually, these are very time-consuming and complex tasks because the features have to be manually crafted. The features are aggregated, combined or split to create features from raw data. This project makes use of ontologies to automatically generate features for the ML algorithms. The features are generated by combining the concepts and relationships that are already in the knowledge base, expressed... -
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EntOpt Layout
Relative entropy optimization network layout plugin
The goal of this project is to implement a graph layout / network visualization algorithm as a Java plugin for Cytoscape (http://cytoscape.org/), using a recently published relative entropy optimization based method, called Unified Data Representation (Kovács IA et al. Sci Rep. 2015). If you are using the plugin, please cite: Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization... -
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A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
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Algorithm Database
Efficient Algorithms implemented in Java
The Aim of this project is to provide a collection of reusable Algorithms which can be used effectively in different scenarios. Algorithm implementations are in Java. Objective here is to implement algorithms which should be more efficient than the JDK implementation and also to create a platform for the researchers who works on Data Mining, Encryption algorithms, ect.. to collaborate and contribute to this project. -
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The KReator project is a collection of software systems, tools, algorithms and data structures for logic-based knowledge representation. Currently, it includes the software systems KReator and MECore and the library Log4KR: - KReator is an integrated development environment (IDE) for relational probabilistic knowledge representation languages such as Bayesian Logic Programs (BLPs), Markov Logic Networks (MLNs), Relational Maximum Entropy (RME), First-Order Probabilistic...
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Egonet is a program for the collection and analysis of egocentric network data. It helps you create the questionnaire, collect data, and provide general global network measures and data matrixes that can be used for further analysis by other software. Source code is hosted at http://github.com/egonet/egonet.
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MYRA
A collection of ACO algorithms for the data mining classification task
MYRA is a collection of Ant Colony Optimization (ACO) algorithms for the data mining classification task. It includes popular rule induction and decision tree induction algorithms. The algorithms are ready to be used from the command line or can be easily called from your own Java code. They are build using a modular architecture, so they can be easily extended to incorporate different procedures and/or use different parameter values. This project is now hosted at: https://github.com/febo... -
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fp4xml
Feed Parser for XML
A feed parser allows the user to control fully the parsing process, in a streaming way: The user enters a buffer of raw, incomplete XML data and gets in turn a collection of parsed XML events. This iteration is repeated at the user's request. So, he decides when to stop. This allows the user to parse a small part of the XML (without reaching the end), or pre-process it before delivering it to a full validating parser. -
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SmartRoot
Semi-automated root image analysis software
SmartRoot is a semi-automated image analysis software which streamlines the quantification of root growth and architecture for complex root systems. The software combines a vectorial representation of root objects with a powerful tracing algorithm which accommodates to a wide range of image source and quality. The software supports a sampling-based analysis of root system images, in which detailed information is collected on a limited number of roots selected by the user according... -
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BBCT is a simple program that allows the user to enter data about baseball cards and search through the collection using limited criteria.
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Applications to support the efficient capture of data from natural science collections specimens (particularly entomological collections), by facilitating pre-capture of data reflecting the storage structure of the collection, imaging of the specimens to separate data capture from specimen handling, and community sourcing transcription of hand written label data. Designed and written by a team at the Museum of Comparative Zoology. Includes a PreCapture barcode application refactored from...
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XML2CSV-Generic-Converter
Flatten XML into CSV to suit your mood
Java XML to CSV (XML2CSV) generic conversion facility. Flattens one or more similar XML files into CSV projections. I made it in order to extract data from big XML files and gather them in files more easily opened with a spreadsheet because I didn't find anything adapted to my needs over the Internet when I needed to (Java + truly generic + self-contained algorithm + Unix like command line options + efficiency). It is packaged as an auto executable Jar for convenient command line... -
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MicroZip
Create,extract and encrypt ZIP,GZIP,TAR,BZIP2,TAZ files on Java mobile
... archives with both classic ZIP encryption and AES 256 encryption algorithm. -
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GUI Ant-Miner is a tool for extracting classification rules from data. It is an updated version of a data mining algorithm called Ant-Miner (Ant Colony-based Data Miner).
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SeqPig
Use Apache Pig to process your large sequencing datasets!
SeqPig is a library for Apache Pig for the distributed analysis of large sequencing datasets. It provides import and export functions for file formats commonly used for sequencing data, as well as a collection of Pig user-defined-functions (UDF’s) to help process aligned and unaligned sequence data. Currently SeqPig supports BAM/SAM, FastQ and Qseq input and output. For more information see the manual at http://seqpig.sourceforge.net/ -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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RDKit
Open-Source Cheminformatics and Machine Learning
A collection of cheminformatics and machine-learning software written in C++ and Python. NOTE: the RDKit source code and downloads are now in github: https://github.com/rdkit/rdkit The core algorithms and data structures are written in C++. Wrappers are provided to use the toolkit from either Python or Java. Additionally, the RDKit distribution includes a PostgreSQL-based cartridge that allows molecules to be stored in relational database and retrieved via substructure and similarity... -
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GA-EoC
GeneticAlgorithm-based search for Heterogeneous Ensemble Combinations
In data classification, there are no particular classifiers that perform consistently in every case. This is even worst in case of both the high dimensional and class-imbalanced datasets. To overcome the limitations of class-imbalanced data, we split the dataset using a random sub-sampling to balance them. Then, we apply the (alpha,beta)-k feature set method to select a better subset of features and combine their outputs to get a consolidated feature set for classifier training... -
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Animal-AV
Animal Algorithm Animation System
Animal is a Java-based system for visualizing and animating algorithms and data structures. Available since 1999, it is one of the established AV systems, and provides one of the largest collections of supported algorithms. Animations can be generated on the fly based on user input - for a large selection of algorithms and topic areas, including, but not limited to, the topic areas of backtracking algorithms, compression, cryptography, basing, searching and sorting. -
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TreeLayout
Efficient and customizable TreeLayout Algorithm in Java, for NetBeans
Efficiently create compact, highly customizable tree layouts - Based on Walker's algorithm with enhancements suggested by Buchheim, Jünger, and Leipert the software builds tree layouts in linear time. I.e. even trees with many nodes are built fast. Downloads are available at https://sourceforge.net/projects/treelayout/files/. For detailed documentation look at the TreeLayout web site http://treelayout.sourceforge.net/. Development for TreeLayout has moved to https://github.com/abego... -
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jPass - Cross-Platform Password Manager
Compiled into a single .jar file. Tiny Password Manager. Portable
I did not see a pre-built version of this software on the original developers Github project (https://github.com/gaborbata/jpass), so I am taking it upon myself to compile the releases as they come, so that others don't have to. --Description-- JPass is a simple, small, portable password manager application with strong encryption. It allows you to store user names, passwords, URLs and generic notes in an encrypted file protected by one master password. I will not add the source... -
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A collection of reusable modules and packages which simplify roguelike game development in Java. Includes demonstrator programs to show how to use the modules.
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The NEDSS Base System (NBS) is a web-based integrated public health disease surveillance system sponsored by the Center for Disease Control and Prevention(CDC). It was developed to provide a NEDSS-standards based system for the secure, accurate, and efficient collection, transmission, and analysis of public health data. It also provides a platform upon which program-specific modules can be built to meet state and program area requirements. State health departments use the NBS...
