Open Source Windows Data Visualization Software - Page 91

The new XVR Developer Studio is based on Eclipse. It allows to create and manage XVR projects, to author s3d and glsl code, to compile, debug and execute scripts in an HTML page. Currently only for Windows user. It needs an installed JRE >= 1.6

To overcome current limitations in published MS data accessibility, we introduce a browser-based spectrum viewer that aims to allow exploration of alternative interpretations for MS spectra and additionally: can be operated by non-specialists, is open source, can be integrated into other software, gives appropriate publication-quality output. Spectrum Viewer is implemented totally on the client side using XHTML for menus and dialogs, SVG for spectrum and peptide display, and Javascript to drive functionality. It comprises 3 parts: (1) the core Spectrum Viewer displays peptide-spectrum matches and implements zooming, mouse-over peaks to highlight matching parts of peptide, mouse-over parts of peptide to highlight matching peaks, export SVG, and API; (2) the Auxiliary Annotator matches peptide to spectrum for given parameters and prepares the data for the Viewer; (3) these reside on a web page that provides the user control over peptides, spectra and other parameters e.g. linker mass.

Xi3D is an X3D renderer and browser for 3D Web content. It contains compliant parsers for VRML'97 types, a java scenegraph, XML bindings using SAX2, a content converter, full runtime and event model, DOM Level 2, vecmath

This Java application serves to transform W3C XML Schema instances into interactive diagrams in SVG format. The diagram represents structure of XML files and provides information about individual items – elements and attributes.

Inter University Multi-Modal Imaging

Yggdrasill is a 3D phylogenetic tree visualization software based on the Unity 5 engine. Intended for educational and scientific purposes this demonstration release allows to display and explore evolutionary relationships between different terrestrial vertebrate species. Currently available features include procedural tree generation of evolutionary data provided by the Tree of Life (ToL) Web Project (http://tolweb.org/tree/), full three dimensional camera controls as well as a web search, an extinct species overlay and more. Later updates will include the full ToL dataset, improve tree generation and overall accessability, as well as adding access to other datasets. Special thanks go to the Tree of Life Web Project and all its contributors for providing the data and to Unity Technologies for free access to Unity 5.

Ytk is a Tcl/Tk program which adds menus, buttons and features to the basic command line driven Yorick program and language. It also enables usage of all Tcl/Tk widgets and functions including buttons, sliders, checkboxes, and other typical TK widgets to

A Julia interface to ZeroMQ. ZMQ.jl is a Julia interface to ZeroMQ, The Intelligent Transport Layer.

ZPR is a program that produces orthophotos. The method used is to give colors to point-cloud (photo obtained by a digital camera, cloud obtained by a laser scanner) and to project the point-cloud to a requested plane. With this method, the projection pla

ZeitWort is a tool for displaying all kinds of interval-based textual information. This could be utterances in a dialogue, which is what we use it for, but it could also be events occuring during the execution of a program.

Zherlock has now changed name to SciCraft and no longer hosted on sourceforge. Visit our new site at http://www.scicraft.org

ZAE is a Zoomable multiple sequence Alignment Editor

Application was designed to provide user a capability to visualize ADC measurements flow on PC monitor and to save data on a hard disk. At a present moment application uses serial port connection for data capturing. That is why at first you should provide all hardware drivers and other resources for ADC that allow to communicate with PC.

ADrillForce project is now part (a component) of the larger project forssim. This project will close. ADrillForce is a reference implementation of haptic (force feedback) algorithms for virutal hard material collision handling and data modification.

Agile2D is a framework that provides a nearly complete implementation of Java2D built using the industry standard OpenGL API.

ai.planet is a virtual world for artificial intelligence. Developers can study and visualize algorithms in a versatile 3D environment.

This software aims help students of analytic geometry courses by visualizating several key concepts.

Animaniac is an animation system. Flexible like STL, templates everywhere. Animaniac provides physics and keyframe animation methods.

The goal of anyscreen is to allow simple development of OpenGL applications running on a wide range of modern output devices. Currently, anyscreen is capable of rendering on multiple displays settings and offers various stereoscopic rendering modes.

Progress bars for threading and multiprocessing tasks on the terminal and Jupyter Notebook. atpbar can display multiple progress bars simultaneously growing to show the progresses of iterations of loops in threading or multiprocessing tasks. atpbar can display progress bars on the terminal and Jupyter Notebook. atpbar can be used with Mantichora. atpbar started its development in 2015 as part of Alphatwirl. atpbar prevented physicists from terminating their running analysis codes, which would take many hours to complete, by showing progress bars indicating their codes were actually running. The progress bars have saved the physicists countless hours in total. atpbar had been the sub-package progress of alphatwirl until it became an independent package, with the name atpbar, in February 2019.

This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. Ascend is an R package comprised of fast, streamlined analysis functions optimized to address the statistical challenges of single cell RNA-seq. The package incorporates novel and established methods to provide a flexible framework to perform filtering, quality control, normalization, dimension reduction, clustering, differential expression and a wide-range of plotting. An analytical framework for big-scale single cell data. Transform percentage-based units into a 2d space to evaluate changes in distribution with both magnitude and direction.

This is a LaTeX package to realise ball and spoke (ball and stick) models used in Chemistry, Physics or other Material Sciences using PGF/TikZ

Render barcodes EAN-8, EAN-13 with 2/5 digit Addon, Postscript EPS export