Showing 88 open source projects for "data analysis"

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  • 1
    The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
    Downloads: 0 This Week
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  • 2
    MCNPydE

    MCNPydE

    MCNP data extraction and display software library

    MCNPydE is a Python library for extracting data from MCNP output file. It requires Python, Matplotlib and Numpy. It is a data reduction tool for MCNP output for ease of results analysis and viewing.
    Downloads: 0 This Week
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  • 3
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 4
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Petroleum.zip/download Download datasets for students of Geostatistics 2017 (Geology and Mining Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Mining.zip/download Old: http://sourceforge.net/projects/geoms2/files/SETS_geoestatistica2_2015.7z/download https://sites.google.com/site/cmrpsoftware/downloads/Quarry_sets.7z?...
    Downloads: 7 This Week
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  • 5
    GeoNotebook

    GeoNotebook

    A Jupyter notebook extension for geospatial visualization and analysis

    GeoNotebook is an open-source extension to the Jupyter Notebook ecosystem that equips users with powerful geospatial visualization and analysis capabilities directly within the notebook interface. It integrates with GeoJS and other geospatial services to enable rich, interactive map rendering, layer control, and GIS data manipulation alongside traditional code and markdown cells in a Jupyter environment. Users can execute Python geospatial analysis and immediately visualize results on slippy web maps, allowing them to explore, annotate, and interpret large spatial datasets without leaving the notebook. ...
    Downloads: 0 This Week
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  • 6
    VividSTORM

    VividSTORM

    Correlated confocal and SMLM data visualization and analysis

    VividSTORM is a free and open-source standalone software with graphical user interface, for the correlated visualization and analysis of superresolution single molecule localization microscopy (SMLM) molecule lists and conventional pixel intensity-based images. The localization points (LPs) within this ROI can be analyzed using the selected built-in functions. NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for...
    Downloads: 0 This Week
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  • 7
    GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
    Downloads: 7 This Week
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  • 8

    ELINT Alchemist

    Plot, analyse and measure ELINT Time-Based data.

    This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01.
    Downloads: 0 This Week
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  • 9

    PyVE

    PyVE is image analysis and visualization environment

    PyVE is image analysis and Visualization Environment focused at clinical use. At the core of it there is a powerful viewer for displaying 3D datasets (MRI, PET, CT) based on VTK. It all comes precompiled allowing painless access to Python (2.x), the ITK toolkit for image analysis, numpy/scipy for numerical calculations, Qt and PyQt4 for the development Graphical User Interfaces. It is what you need for fast prototyping and development of more complex projects.
    Downloads: 0 This Week
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  • 10
    pyEBSD-GUI

    pyEBSD-GUI

    A free software to post-process EBSD data.

    pyEBSD-GUI is a free software to post-process Electron Backscatter Diffraction (EBSD) data, inducing IPF mapping, image quality mapping, phase mapping etc, plotting pole figure, data segmentation, statistic analysis of the misorientation distribution etc. The software is written by python, and it supports both script and graphic user interface (GUI). pyEBSD V1.0 will be released soon.
    Downloads: 0 This Week
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  • 11

    Py3DN

    Morphometric analysis and visualization of the 3D structure of neurons

    ...The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z
    Downloads: 0 This Week
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  • 12
    Analysis software for Nbody/SPH or SPH simulations (e.g. performed with Gadget II). See http://sourceforge.net/apps/wordpress/hyplot/about and http://sourceforge.net/apps/trac/hyplot/wiki for more information.
    Downloads: 0 This Week
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  • 13
    UV-CDAT

    UV-CDAT

    Ultrascale Visualization Climate Data Analysis Tools

    Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT), is a powerful and complete front-end to a rich set of visual-data exploration and analysis capabilities well suited for climate-data analysis problems.
    Downloads: 1 This Week
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  • 14
    This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...
    Downloads: 2 This Week
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  • 15
    BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
    Downloads: 0 This Week
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  • 16
    MSCViewer

    MSCViewer

    A tool for visualization and analysis of logs as sequence diagrams

    MSCViewer is a tool intended for debugging of control flows in concurrent, distributed systems. The tool loads logs generated by various entities in the system and visualize a sequence diagram chart for events and interactions. The diagram is fully interactive: entity can be added/removed from the diagram and shuffled; events can be filtered, searched, highlighted and annotated with comments. MSCViewer features integration with a Python interpreter which allows writing Python scripts...
    Downloads: 0 This Week
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  • 17
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 18
    MicrobeGPS

    MicrobeGPS

    The Explorative Taxonomic Profiling Tool for Metagenomic Data

    MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily.
    Downloads: 0 This Week
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  • 19
    MicroView
    MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
    Downloads: 10 This Week
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  • 20
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
    Downloads: 0 This Week
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  • 21
    Vibeplot presents a new and attractive way to visualize vibrational analysis from density functional calculations (DFT). It is especially targeted at the chemists. The interface can either be scripted or used interactively with QVibeplot.
    Downloads: 0 This Week
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  • 22
    COV2HTML

    COV2HTML

    A visualization and analysis tool of Bacterial NGS data for Biologists

    COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS mapping coverage data (DNA-seq, RNA-seq, ChIP-seq and TSS) performed in different prokaryotic organisms (bacteria, viruses...) or different experimental conditions (mutant versus wild type strains or different growth states…) facilitating studies.
    Downloads: 0 This Week
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  • 23

    slycat

    Web-based data science analysis and visualization platform.

    This is Slycat - a web-based data science analysis and visualization platform, created at Sandia National Laboratories. The goal of the Slycat project is to develop processes, tools and techniques to support data science, particularly analysis of large, high-dimensional data.
    Downloads: 0 This Week
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  • 24
    Pumilio
    Pumilio is a web-based sound analysis and archive system for almost any kind of sound file with tools to see the spectrogram of the sound, select regions for further analysis and insertion in a database, filtering, and many other manipulations.
    Downloads: 0 This Week
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  • 25
    sigrok
    The sigrok project aims at creating a portable, cross-platform, Free/Libre/Open-Source signal analysis software suite that supports various device types, such as logic analyzers, MSOs, oscilloscopes, multimeters, LCR meters, sound level meters, thermometers, anemometers, light meters, dataloggers, function generators, power supplies, GPIB interfaces, and more.
    Downloads: 1 This Week
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