Open Source Data Visualization Software - Page 9
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LineSearches.jl
Line search methods for optimization and root-finding
Line search methods for optimization and root-finding. This package provides an interface to line search algorithms implemented in Julia. The code was originally written as part of Optim, but has now been separated out to its own package. -
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LinearOperators.jl
Linear Operators for Julia
Operators behave like matrices (with some exceptions - see below) but are defined by their effect when applied to a vector. They can be transposed, conjugated, or combined with other operators cheaply. The costly operation is deferred until multiplied with a vector. -
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LiveServer.jl
Simple development server with live-reload capability for Julia
This is a simple and lightweight development web-server written in Julia, based on HTTP.jl. It has live-reload capability, i.e. when modifying a file, every browser (tab) currently displaying the corresponding page is automatically refreshed. -
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MLJBase.jl
Core functionality for the MLJ machine learning framework
Repository for developers that provides core functionality for the MLJ machine learning framework. MLJ is a Julia framework for combining and tuning machine learning models. This repository provides core functionality for MLJ. -
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ManifoldLearning
Package for manifold learning and nonlinear dimensionality reduction
A Julia package for manifold learning and nonlinear dimensionality reduction. Most of the methods use k-nearest neighbors method for constructing local subspace representation. By default, neighbors are computed from a distance matrix of a dataset. This is not an efficient method, especially, for large datasets. -
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Measurements.jl
Error propagation calculator and library for physical measurements
Error propagation calculator and library for physical measurements. It supports real and complex numbers with uncertainty, arbitrary precision calculations, operations with arrays, and numerical integration. Physical measures are typically reported with an error, a quantification of the uncertainty of the accuracy of the measurement. Whenever you perform mathematical operations involving these quantities you have also to propagate the uncertainty, so that the resulting number will also have an attached error to quantify the confidence about its accuracy. Measurements.jl relieves you from the hassle of propagating uncertainties coming from physical measurements, when performing mathematical operations involving them. The linear error propagation theory is employed to propagate the errors. -
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MessyTimeSeries.jl
A Julia implementation of basic tools for time series analysis
A Julia implementation of basic tools for time series analysis compatible with incomplete data. Advanced estimation and validation algorithms are included in MessyTimeSeriesOptim. -
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MethodOfLines.jl
Automatic Finite Difference PDE solving with Julia SciML
MethodOfLines.jl is a Julia package for automated finite difference discretization of symbolically defined PDEs in N dimensions. It uses symbolic expressions for systems of partial differential equations as defined with ModelingToolkit.jl, and Interval from DomainSets.jl to define the space(time) over which the simulation runs. This project is under active development, therefore the interface is subject to change. The docs will be updated to reflect any changes, please check back for current usage information. -
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Neuroglancer
WebGL-based viewer for volumetric data
Neuroglancer is a WebGL-based visualization tool designed for exploring large-scale volumetric and neuroimaging datasets directly in the browser. It allows users to interactively view arbitrary 2D and 3D cross-sections of volumetric data alongside 3D meshes and skeleton models, enabling precise examination of neural structures and biological imaging results. Its multi-pane interface synchronizes multiple orthogonal views with a central 3D viewport, making it ideal for analyzing complex brain imaging data such as connectomics datasets. Neuroglancer operates entirely client-side, fetching data over HTTP in a variety of supported formats including Neuroglancer precomputed, N5, Zarr, and NIfTI, among others. The viewer is built with a multi-threaded architecture, separating rendering and data processing to ensure smooth performance even with massive datasets. Extensively used in neuroscience research, Neuroglancer supports integration with tools. -
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PDFIO.jl
PDF Reader Library for Native Julia.
PDFIO is a native Julia implementation for reading PDF files. It's a 100% Julia implementation of the PDF specification. Other than a few well-established algorithms like flate decode (zlib library) or cryptographic operations (OpenSSL library) almost all of the APIs are written in native Julia. PDF files are in existence for over three decades. Implementations of the PDF writers are not always to the specification or they may even vary significantly from vendor to vendor. Every time, you get a new PDF file there is a possibility that it may not work to the best interpretation of the specification. A script-based language makes it easier for the consumers to quickly modify the code and enhance to their specific needs. -
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POMDPs
Interface for defining, solving, simulating Markov decision processes
A Julia interface for defining, solving and simulating partially observable Markov decision processes and their fully observable counterparts. The POMDPs.jl package contains only the interface used for expressing and solving Markov decision processes (MDPs) and partially observable Markov decision processes (POMDPs). The POMDPTools package acts as a "standard library" for the POMDPs.jl interface, providing implementations of commonly-used components such as policies, belief updaters, distributions, and simulators. -
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PlotlyJS
Julia library for plotting with plotly.js
Julia interface to plotly.js visualization library. This package constructs plotly graphics using all local resources. To interact or save graphics to the Plotly cloud, use the Plotly package. -
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Pluto.jl
Simple reactive notebooks for Julia plutojl.org
We are on a mission to make scientific computing more accessible and fun. Writing a notebook is not just about writing the final document, Pluto empowers the experiments and discoveries that are essential to getting there. -
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ProbabilisticCircuits.jl
Probabilistic Circuits from the Juice library
This module provides a Julia implementation of Probabilistic Circuits (PCs), tools to learn structure and parameters of PCs from data, and tools to do tractable exact inference with them. Probabilistic Circuits provides a unifying framework for several family of tractable probabilistic models. PCs are represented as computational graphs that define a joint probability distribution as recursive mixtures (sum units) and factorizations (product units) of simpler distributions (input units). Given certain structural properties, PCs enable different range of tractable exact probabilistic queries such as computing marginals, conditionals, maximum a posteriori (MAP), and more advanced probabilistic queries. -
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ProximalAlgorithms.jl
Proximal algorithms for nonsmooth optimization in Julia
A Julia package for non-smooth optimization algorithms. This package provides algorithms for the minimization of objective functions that include non-smooth terms, such as constraints or non-differentiable penalties. -
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PyCall.jl
Package to call Python functions from the Julia language
Package to call Python functions from the Julia language. This package provides the ability to directly call and fully interoperate with Python from the Julia language. You can import arbitrary Python modules from Julia, call Python functions (with automatic conversion of types between Julia and Python), define Python classes from Julia methods, and share large data structures between Julia and Python without copying them. -
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RayTracer.jl
Differentiable RayTracing in Julia
This package was written in the early days of Flux / Zygote. Both these packages have significantly improved over time. Unfortunately, the current state of this package of has not been updated to reflect those improvements. It also seems that it might be better to gradually transition to defining the adjoints directly using ChainRules. A Ray Tracer written completely in Julia. This allows us to leverage the AD capabilities provided by Zygote to differentiate through the Ray Tracer. -
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ReachabilityAnalysis.jl
Compute reachable states of dynamical systems
Reachability analysis is concerned with computing rigorous approximations of the set of states reachable by a dynamical system. In the scope of this package are systems modeled by continuous or hybrid dynamical systems, where the dynamics change with discrete events. Systems are modeled by ordinary differential equations (ODEs) or semi-discrete partial differential equations (PDEs), with uncertain initial states, uncertain parameters or non-deterministic inputs. -
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Reduce.jl
Symbolic parser for Julia language term rewriting using REDUCE algebra
REDUCE is a portable general-purpose computer algebra system. It is a system for doing scalar, vector and matrix algebra by computer, which also supports arbitrary precision numerical approximation and interfaces to gnuplot to provide graphics. It can be used interactively for simple calculations (as illustrated in the screenshot below) but also provides a full programming language, with a syntax similar to other modern programming languages. REDUCE supports alternative user interfaces including Run-REDUCE, TeXmacs and GNU Emacs. REDUCE (and its complete source code) is available free of charge for most common computing systems, in some cases in more than one version for the same machine. The manual and other support documents and tutorials are also included in the distributions. -
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ReinforcementLearningAnIntroduction.jl
Julia code for the book Reinforcement Learning An Introduction
This project provides the Julia code to generate figures in the book Reinforcement Learning: An Introduction(2nd). One of our main goals is to help users understand the basic concepts of reinforcement learning from an engineer's perspective. Once you have grasped how different components are organized, you're ready to explore a wide variety of modern deep reinforcement learning algorithms in ReinforcementLearningZoo.jl. -
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Remotery
Single C file, Realtime CPU/GPU Profiler with Remote Web Viewer
Remotery is a real-time CPU/GPU profiler implemented as a single C file, providing developers with immediate insights into the performance of their applications. It features a remote web-based viewer that runs in browsers like Chrome, Firefox, and Safari, allowing for cross-platform performance analysis. Remotery supports profiling multiple threads and GPU contexts, offering a comprehensive view of an application's performance characteristics. -
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ResultTypes.jl
A Result type for Julia—it's like Nullables for Exceptions
ResultTypes provides a Result type that can hold either a value or an error. This allows us to return a value or an error in a type-stable manner without throwing an exception. -
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SPX
A simple & straight-to-the-point PHP profiling extension
SPX, which stands for Simple Profiling eXtension, is just another profiling extension for PHP. It differentiates itself from other similar extensions as being totally free and confined to your infrastructure (i.e. no data leaks to a SaaS). Very simple to use: just set an environment variable (command line) or switch on a radio button (web request) to profile your script. Thus, you are free of manually instrumenting your code (Ctrl-C a long running command line script is even supported). Using a dedicated browser extension or command line launcher. Multi metrics capable: 22 are currently supported (various time & memory metrics, included files, objects in use, I/O...). Able to collect data without losing context. For example Xhprof (and potentially its forks) aggregates data per caller / callee pairs, which implies the loss of the full call stack and forbids timeline or Flamegraph based analysis. -
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SumOfSquares.jl
Sum of Squares Programming for Julia
SumOfSquares.jl is a JuMP extension that, when used in conjunction with MultivariatePolynomial and PolyJuMP, implements a sum of squares reformulation for polynomial optimization. -
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Surrogates.jl
Surrogate modeling and optimization for scientific machine learning
A surrogate model is an approximation method that mimics the behavior of a computationally expensive simulation. In more mathematical terms: suppose we are attempting to optimize a function f(p), but each calculation of f is very expensive. It may be the case we need to solve a PDE for each point or use advanced numerical linear algebra machinery, which is usually costly. The idea is then to develop a surrogate model g which approximates f by training on previous data collected from evaluations of f.
