Open Source MATLAB Data Management Systems
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MATLAB Data Management Systems
View 4303 business solutionsBrowse free open source MATLAB Data Management Systems and projects below. Use the toggles on the left to filter open source MATLAB Data Management Systems by OS, license, language, programming language, and project status.
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GMAT
General Mission Analysis Tool
The General Mission Analysis Tool (GMAT) is an open-source tool for space mission design and navigation. GMAT is developed by a team of NASA, private industry, and public and private contributors. The GMAT development team is pleased to announce the release of GMAT version R2026a. For a complete list of new features, compatibility changes, and bug fixes, see the R2026a Release Notes in the Users Guide. -
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YALMIP
MATLAB toolbox for optimization modeling
MATLAB toolbox for optimization modeling. -
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OpenFace
A state-of-the-art facial behavior analysis toolkit
OpenFace is an advanced facial behavior analysis toolkit intended for computer vision and machine learning researchers, those in the affective computing community, and those who are simply interested in creating interactive applications based on facial behavior analysis. The OpenFace toolkit is capable of performing several complex facial analysis tasks, including facial landmark detection, eye-gaze estimation, head pose estimation and facial action unit recognition. OpenFace is able to deliver state-of-the-art results in all of these mentioned tasks. OpenFace is available for Windows, Ubuntu and macOS installations. It is capable of real-time performance and does not need to run on any specialist hardware, a simple webcam will suffice. -
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EEGLAB
EEGLAB is an open source signal processing environment
EEGLAB is an open source, MATLAB-based interactive environment for analyzing electrophysiological signals such as EEG and MEG. It incorporates powerful tools for data import, preprocessing, independent component analysis (ICA), time-frequency analysis, artifact rejection, and visualization—all within a GUI framework that also supports scripting and plugin extensions. EEGLAB is an open source signal processing environment for electrophysiological signals running on Matlab and Octave (command line only for Octave). This folder contains original Matlab functions from the EEGLAB (formerly ICA/EEG) Matlab toolbox, all released under the Gnu public license (see eeglablicence.txt). See the EEGLAB tutorial and reference paper (URLs given below) for more information. All distributed EEGLAB functions (admin, sigproc, pop, misc). -
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hctsa
Highly comparative time-series analysis
hctsa is a Matlab software package for running highly comparative time-series analysis. It extracts thousands of time-series features from a collection of univariate time series and includes a range of tools for visualizing and analyzing the resulting time-series feature matrix. -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
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gramm
Gramm is a complete data visualization toolbox for Matlab
Gramm is a MATLAB toolbox that enables the rapid creation of complex, publication-quality figures. Its design philosophy focuses on a declarative approach, where users specify the desired end result, as opposed to the traditional imperative method involving for loops, if/else statements, etc. The MATLAB implementation of gramm is inspired by the "grammar of graphics" principles (Wilkinson 1999) and the ggplot2 library for R by Hadley Wickham. As a reference to this inspiration, gramm stands for GRAMmar of graphics for MATLAB. A similar library called Seaborn also exists for Python. Gramm has been used in many publications from varied fields and is particularily suited for neuroscience, from human movement psychophysics (Morel et al. 2017), to electrophysiology (Morel et al. 2016; Ferrea et al. 2017), human functional imaging (Wan et al. 2017) and animal training (Berger et al. 2017). -
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Eventer
Rapid, unbiased, reproducible analysis of synaptic events
Eventer is a programme designed for the detection of spontaneous synaptic events measured by electrophysiology or imaging. The software combines deconvolution for detection, and variable length template matching approaches for screening out false positive events. Eventer also includes a machine learning-based approach allowing users to train a model to implement their ‘expert’ selection criteria across data sets without bias. Sharing models allows users to implement consistent analysis procedures. The software is coded in MATLAB, but has been compiled as standalone applications for Windows, Mac and Linux. Please visit the official Eventer website for more info https://eventerneuro.netlify.app/ While the paper is in preparation, please cite as; Winchester, G., Liu, S., Steele, O.G., Aziz, W. and Penn, A.C. (2020) Eventer. Software for the detection of spontaneous synaptic events measured by electrophysiology or imaging. http://doi.org/10.5281/zenodo.3991676 -
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TIGRE
TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox
TIGRE is an open-source toolbox for fast and accurate 3D tomographic reconstruction for any geometry. Its focus is on iterative algorithms for improved image quality that have all been optimized to run on GPUs (including multi-GPUs) for improved speed. It combines the higher-level abstraction of MATLAB or Python with the performance of CUDA at a lower level in order to make it both fast and easy to use. TIGRE is free to download and distribute: use it, modify it, add to it, and share it. Our aim is to provide a wide range of easy-to-use algorithms for the tomographic community "off the shelf". We would like to build a stronger bridge between algorithm developers and imaging researchers/clinicians by encouraging and supporting contributions from both sides to TIGRE. -
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PrepMS is a simple-to-use graphical application for MS data preprocessing, peak detection, and visual data quality assessment. PrepMS is a compiled stand-alone application. Project homepage: http://stat.tamu.edu/~yuliya/prepMS.html
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ExpSuite is a software framework for applications to perform psychoacoustical experiments. ExpSuite allows acoustic and electric stimulation for normal hearing and cochlear implant listeners, respectively.
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Waterloo
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab. -
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ReViSP
ReViSP, a 3D volume rendering MATLAB tool for multicellular spheroids
Reconstruction and Visualization from a Single Projection (ReViSP) tool: a 3D volume rendering method we developed to reconstruct the 3D shape of multicellular spheroids, besides estimating the volume by counting the voxels (3D pixels) fully included in the 3D surface. ReViSP is written in MATLAB (The MathWorks, Inc., Massachusetts, USA) and the source code is freely provided. Requirements for running ReViSP from the source code: MATLAB 2020a and Image Processing Toolbox 11.1 or later versions. Please, when using this software, cite these articles: (a) F. Piccinini, et al., Cancer multicellular spheroids: Volume assessment from a single 2D projection. Computer Methods and Programs in Biomedicine, 118(2):95–106, 2015. (b) F. Piccinini, et al., Single-image based methods used for non-invasive volume estimation of cancer spheroids: a practical assessing approach based on entry-level equipment. Computer Methods and Programs in Biomedicine, 135:51-60, 2016. -
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JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
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Visualization and clustering analysis of X-Ray diffraction data from combinatorial thin film libraries.
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MPH to Tecplot
Converts 3-D COMSOL mph file to a Tecplot compatible file
The MATLAB m.file will export data contained within a 3-D COMSOL mph file to a datafile in the format of an ascii TECPLOT file. The underlying engine for this export is the COMSOL - "LiveLink for MATLAB" module, with Matlab as the manager for the file import and export. -
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ATLAS_mPBPK
Modeling and Simulation of mPBPK models
ATLAS mPBPK is a MATLAb-based tool for modeling and Simulation of minimal Physiology Based Pharmacokinetic (mPBPK) models of small and large molecules. The tool enables the users to perform: i) PK data visualization, ii) simulation, iii) parameter optimization, and iv) local sensitivity analysis (SA) of mPBPK models in a simple and efficient manner. -
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CS Miner
A tool for Navigating in Chemical Space
CS-Miner stands for Chemical Space Miner and is a software tool for navigating in chemical space of compound databases. It helps for deriving appropriate classification models and performing virtual screening. Download it via: http://csminer.com/csm/?p=7 A quick tutorial is available through: http://csminer.com/csm/?p=8 -
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The Databionics ESOM Tools offer many data mining tasks using Emergent Self-Organizing Maps. Visualization, clustering, and classification of high-dimensional data using databionics principles can be performed interactively or automatically.
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LAMBDA is a MatLab toolkit that performs multivariate autoregressive first-order data analysis. LAMBDA estimates community interactions using matrix algebra. The target audience is scientists with long-term ecological data.
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MS2Browser
LC-MS/MS data browser designed for siderophore analysis
MS2Browser is a tool for interactive pre-processing, analysis and visualization of LC-MS/MS data. Input is an mzXML file with centroided LC-MS/MS data. The program is written in MatLab and it was designed for the analysis of siderophores (iron transporting small molecules) in bacterial media. Some of the functionality and use of MS2Browser is described as part as an open-access book chapter: http://www.intechopen.com/books/applications-from-engineering-with-matlab-concepts/small-molecule-lc-ms-ms-fragmentation-data-analysis-and-application-to-siderophore-identification A siderophore structural database assembled for this project can be found alongside the MS2Browser software (.cfw format to be used with ChemBioFinder(TM) ). NOTE: The program is written for personal use to assist siderophore analysis using high-resolution LC-MS/MS data. Please contact me if you have any questions about its use, bugs, etc. -
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SPAT
Satellite Power Analysis Tool
# Satellite Power Analysis Tool (SPAT) The tool was originally created to aid during the Satellite Power System design process, however it has evolved to a Satellite Missoin design tool. The user defines the mission and the Satellite design paramenters and, the tool will output: - Power analysis - Battery charge/discharge analysis - Link budget - Ground track coverage - Ground station visibility SPAT has been developed in MATLAB and MCR (Matlab runtime) is required. SPAT is pre-compiled and currently available for MacOS and Windows email: aitorvs(AT)gmail.com -
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This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.
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The purpose of this project is to implement a java program that can show/edit Neural Network objects made in matlab.