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Showing 19 open source projects for "summary"
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ggstatsplot
Enhancing {ggplot2} plots with statistical analysis
...The central idea of {ggstatsplot} is simple: combine these two phases into one in the form of graphics with statistical details, which makes data exploration simpler and faster. Summary of statistical tests and effect sizes. -
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gtsummary
Presentation-Ready Data Summary and Analytic Result Tables
gtsummary is an R package for creating elegant, customizable, publication-ready summary tables of datasets and statistical models. It provides concise code to produce demographic tables (tbl_summary()), regression result tables, and more, with flexible styling options for reporting. -
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whylogs
The open standard for data logging
...With whylogs, users are able to generate summaries of their datasets (called whylogs profiles) which they can use to track changes in their dataset Create data constraints to know whether their data looks the way it should. Quickly visualize key summary statistics about their datasets. whylogs profiles are the core of the whylogs library. They capture key statistical properties of data, such as the distribution (far beyond simple mean, median, and standard deviation measures), the number of missing values, and a wide range of configurable custom metrics. By capturing these summary statistics, we are able to accurately represent the data and enable all of the use cases described in the introduction. -
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see
Visualisation toolbox for beautiful and publication-ready figures
see is an R package that serves as the visualization component of the easystats ecosystem, providing plotting utilities to produce publication-ready visualizations of statistical model parameters, diagnostics, predictions, and performance metrics. It works in conjunction with other easystats packages (such as parameters, performance, modelbased, bayestestR, etc.) to convert model outputs or summary objects into visual forms (dot-and-whisker plots, diagnostic plots, residual plots, etc.). It includes themes, scales, geoms for ggplot2, and custom color palettes to make visual summaries more informative and attractive. -
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5
GoldenCheetah
Performance Software for Cyclists, Runners, Triathletes and Coaches
Analyze using summary metrics like BikeStress, TRIMP, or RPE. Extract insight via models like Critical Power and W'bal. Track and predict performance using models like Banister and PMC. Optimize aerodynamics using Virtual Elevation. Train indoors with ANT and BTLE trainers. Upload and Download with many cloud services including Strava, Withings, and Today's Plan. -
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Coverage.jl
Take Julia code coverage and memory allocation results, do useful thin
Julia can track how many times, if any, each line of your code is run. This is useful for measuring how much of your code base your tests actually test, and can reveal the parts of your code that are not tested and might be hiding a bug. You can use Coverage.jl to summarize the results of this tracking or to send them to a service like Coveralls.io or Codecov.io. Julia can track how much memory is allocated by each line of your code. This can reveal problems like type instability, or... -
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ydata-profiling
Create HTML profiling reports from pandas DataFrame objects
ydata-profiling primary goal is to provide a one-line Exploratory Data Analysis (EDA) experience in a consistent and fast solution. Like pandas df.describe() function, that is so handy, ydata-profiling delivers an extended analysis of a DataFrame while allowing the data analysis to be exported in different formats such as html and json. -
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Sweetviz
Visualize and compare datasets, target values and associations
Sweetviz is an open-source Python library that generates beautiful, high-density visualizations to kickstart EDA (Exploratory Data Analysis) with just two lines of code. Output is a fully self-contained HTML application. The system is built around quickly visualizing target values and comparing datasets. Its goal is to help quick analysis of target characteristics, training vs testing data, and other such data characterization tasks. Shows how a target value (e.g. "Survived" in the Titanic... -
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QUAST
Quality Assessment Tool for Genome Assemblies
...QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A comprehensive analysis results in summary tables (in plain text, tab-separated, and LaTeX formats) and colorful plots. The tool also produces web-based reports condensing all information in one easy-to-navigate file. QUAST and its three follow-up papers (MetaQUAST, Icarus, QUAST-LG) papers were published in Bioinformatics; the last paper (WebQUAST) is out in Nucl Acid Research. -
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PipeRider
Code review for data in dbt
PipeRider automatically compares your data to highlight the difference in impacted downstream dbt models so you can merge your Pull Requests with confidence. PipeRider can profile your dbt models and obtain information such as basic data composition, quantiles, histograms, text length, top categories, and more. PipeRider can integrate with dbt metrics and present the time-series data of metrics in the report. PipeRider generates a static HTML report each time it runs, which can be viewed... -
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missingno
Missing data visualization module for Python
Messy datasets? Missing values? missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities that allows you to get a quick visual summary of the completeness (or lack thereof) of your dataset. Just pip install missingno to get started. This quickstart uses a sample of the NYPD Motor Vehicle Collisions Dataset dataset. The msno.matrix nullity matrix is a data-dense display which lets you quickly visually pick out patterns in data completion. At a glance, date, time, the distribution of injuries, and the contribution factor of the first vehicle appear to be completely populated, while geographic information seems mostly complete, but spottier. ... -
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HiPlot
HiPlot makes understanding high dimensional data easy
...Because it renders as self-contained HTML, you can embed the visualization in notebooks, export it, or serve it as a lightweight web app for teammates. HiPlot also offers summary statistics, correlation hints, and outlier highlighting to surface patterns that aren’t obvious from raw tables. -
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pycoQC
pycoQC computes metrics and generates Interactive QC plots
PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. PycoQC relies on the sequencing_summary.txt file generated by Albacore and Guppy, but if needed it can also generate a summary file from basecalled fast5 files. The package supports 1D and 1D2 runs generated with Minion, Gridion and Promethion devices and basecalled with Albacore 1.2.1+ or Guppy 2.1.3+. PycoQC is written in pure Python3. Python 2 is not supported. -
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Hetionet
Hetionet: an integrative network of disease
Hetionet is a hetnet — network with multiple node and edge (relationship) types — which encodes biology. The hetnet was designed for Project Rephetio, which aims to systematically identify why drugs work and predict new therapies for drugs. The JSON and Neo4j formats contain node and edge properties, which are absent in the TSV and matrix formats, including licensing information. Therefore the recommended formats are JSON and Neo4j. Our hetio package in Python reads the JSON format, but it... -
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EPRI Open PQ Dashboard
Demos new techniques for extracting information from PQ data files
Open PQ Dashboard version 1.0 provides visual displays to quickly convey the status and location of power quality (PQ) anomalies throughout the electrical power system. Summary displays starts with the choice of a geospatial map-view or annunciator panel, both with unique visualizations for across-the-room visualizations fit for a PQ operations center. Drill-downs are in place for various statistics and guide users all the way down to the waveform level. This version consist of a few proof-of-concept applications of applying event severity and trend values to heatmap displays—giving the PQ engineers a wide-area status of PQ for quick interpretation. ... -
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Xmind
The most popular mindmapping and brainstorming software
Professional and powerful brainstorming and mind mapping software tool, open source, Eclipse Community Award winner, often used for capture ideas, knowledge/project management and GTD, supporting fishbones/org-charts/tree charts/spreadsheets, easy-to-use. -
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mendelFix
Correction of SNP Mendelian errors in trio data
mendelFix is a Perl script for checking Mendelian errors in genome-wide SNP data of trio designs. The program takes 12-recoded PLINK PED and MAP files as input, and calculates a series of summary statistics for Mendelian errors, sets as missing offspring genotypes that present Mendelian inconsistencies, and implements a simplistic procedure to infer missing genotypes using parent information. The program can be easily incorporated in any pipeline for family-based SNP data analysis, and is distributed as free software under the GNU General Public License. ... -
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CLIChart is for quick summarising and visualisation of data, especially from system logs. It extracts summary data from text files, and generates simple charts from tabular data on the command line (CLI). Charts can be displayed in a window or saved.
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Visual IP is a network protocol analyzer that works in any operating system with a java VM. At the moment it only allows you to examine data from the disk, and created by tcpdump. You can interactively browse the capture data, viewing summary and det
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