Search Results for "pdf tool python" - Page 3
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Showing 82 open source projects for "pdf tool python"
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PyX is a Python package for the creation of EPS, PS, PDF and SVG files. It combines an abstraction of the PostScript drawing model with a TeX/LaTeX interface. Complex tasks like 2d and 3d plots in publication-ready quality are built out of these primitives.
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Clustergrammer
An interactive heatmap visualization built using D3.js
Clustergrammer is a visualization library built using D3.js that enables intuitive interaction with high-dimensional data. Clustergrammer was built with biological data in mind. Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data. -
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SBML2LaTeX
A documentation and report generator for systems biological models
SBML2LATEX is a tool to convert files in the System Biology Markup Language SBML) format into LATEX files. A convenient online version is available, which allows the user to directly generate report from SBML in form of PDF or TeX, which can be further processed to various file types including DVI, PS, EPS, GIF, JPG, or PNG. SBML2LATEX can also be downloaded and used locally in batch mode or interactively with its Graphical User Interface or several command line options. ... -
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Matplotlib is a python library for making publication quality plots using a syntax familiar to MATLAB users. Matplotlib uses numpy for numerics. Output formats include PDF, Postscript, SVG, and PNG, as well as screen display. As of matplotlib version 1.5, we are no longer making file releases available on SourceForge. Please visit http://matplotlib.org/users/installing.html for help obtaining matplotlib.
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colorview2d
Extendible 2D color plotting tool.
Visualize and analyze 3D data files using 2D colorplots. Inspired by spyview. Written in python. -
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MSCViewer
A tool for visualization and analysis of logs as sequence diagrams
...MSCViewer features integration with a Python interpreter which allows writing Python scripts interacting with the model. This powerful feature can be used to automate validatation of distributed control flows, integrate with graphing infrastructure, etc. -
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Sample Level Musical Timeline
Sample Level Modulation of Musical Timeline
...Please also read the project document file (readme.doc/pdf) for more details -
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QuickNXS
Polarized ToF reflectivity raw data analysis tool
Data evaluation tool for the magnetism reflectometer at the spallation neutron source (BL-4A@SNS). Reads raw nexus files (HDF5) of histogrammed or event mode data to create reflectivity curves and 2D Q-maps. -
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JBerd
Java tools for decoding and manipulating BER encoded ASN.1 Files
A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER encoded files to flat files for processing by other facilities • JBerd Decoder objects. A set of Java facilities for writing BER applications that require BER decoding Go to the "files" section (link at the top of this page) to download a pdf of detailed documentation. -
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MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
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NanoCap
Carbon Fullerene and Capped Nanotube Generator
NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code. -
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COV2HTML
A visualization and analysis tool of Bacterial NGS data for Biologists
COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS... -
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BriPy
A BRIC-seq data analysis package written in Python.
...It employs metabolic labeling by BrU of newly synthesized RNAs to chase chronological decreases of BrU-labeled RNA (Pulse-chase labeling), followed by immunoprecipitation with antibody for BrU, construction of cRNA library for High-throughput sequencing and computational data analysis. -What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. ... -
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Nuclei
Feature rich GUI for nuclear decay schemes
Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. Nagl, et al., NIM A 726 (2013),... -
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Workshop resource manager
Easy and fast tool for managing home workshop resources
Storekeeper is small tool that helps you to keep an eye on your resources in home lab or workshop. It can be used in several places and, thanks to it's single-file and synchronize option, merge data between users. -
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Plotmeister is a data exploration tool. It parses your ASCII data and generates a simple (text-based) table format. You can modify this table and eventually create nice looking figures.
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NLOPredict is a nonlinear optical prediction and data analysis tool. Nonlinear optical measurements can yield information about the structure of crystals, and orientation of molecules at surfaces and interfaces.
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A tool that parses SQL Select statements and generates a diagram. The diagram shows parts of the underlying SQL directly in the diagram. For example x=30 , GROUP BY (year), HAVING MIN(age) > 18. It is easy to see cartesian joins and/or loops.
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Open Source Particle Image Velocimetry
Open Source Particle Image Velocimetry and PIV Analysis
OpenPIV is an initiative of scientists to develop a software, algorithms and methods for the state-of-the-art experimental tool of Particle Image Velocimetry (PIV) which are free, open source, and easy to operate. -
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Metropolis is a visualization tool for TRANSIMS traffic simulation output. It specializes in viewing the dynamic outputs of the micro-simulator, such as vehicle motion and other time-varying data.
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A tool for visualization, classification, and quantification of three-dimensional secondary ion mass spectrometry data.
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This is a neat little tool to visualize binary data in a graphical form. It's really interesting to look at different types of files.
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easy to use sepctrography software. allow to display spectrography curves, and to overlay severals curves. you can create firste or second derivatives from the curves, or place marks to identify peaks. finals drawings can be saved as png or pdf files.
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Graphite is a Python graphing package currently under development which uses either SPING or PIDDLE (http://piddle.sourceforge.net). It produces PS, PDF, SVG output, bitmap, TK or wXpython with optional modules.
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pyLastFM graph is commandline tool for creating a nice looking graph time graph from Last.fm profile data. It uses the audioscrobbler.net XML interface and can create very high resolution output images.
