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Showing 35 open source projects for "construction"
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FunSQL.jl
Julia library for compositional construction of SQL queries
FunSQL is a Julia library for the compositional construction of SQL queries. Julia programmers sometimes need to interrogate data with the Structured Query Language (SQL). But SQL is notoriously hard to write in a modular fashion. FunSQL exposes full expressive power of SQL with compositional semantics. FunSQL allows you to build queries incrementally from small independent fragments. This approach is particularly useful for building applications that programmatically construct SQL queries. -
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MIRT.jl
MIRT: Michigan Image Reconstruction Toolbox (Julia version)
MIRT.jl is a collection of Julia functions for performing image reconstruction and solving related inverse problems. It is very much still under construction, although there are already enough tools to solve useful problems like compressed sensing MRI reconstruction. Trying the demos is a good way to get started. The documentation is even more still under construction. -
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FinEtools.jl
Finite Element tools in Julia
FinEtools is a package for basic operations on finite element meshes: Construction, modification, selection, and evaluation of quantities defined on a mesh. Utilities are provided for maintaining mesh-based data (fields), for defining normals and loads, for working with physical units and coordinate systems, and for integrating over finite element meshes. -
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PowerSimulations.jl
Julia for optimization simulation and modeling of PowerSystems
PowerSimulations.jl is a Julia package for power system modeling and simulation of Power Systems operations. Provide a flexible modeling framework that can accommodate problems of different complexity and at different time scales. Streamline the construction of large-scale optimization problems to avoid repetition of work when adding/modifying model details. Exploit Julia's capabilities to improve computational performance of large-scale power system quasi-static simulations. The flexible modeling framework is enabled through a modular set of capabilities that enable scalable power system analysis and exploration of new analysis methods. ... -
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ggraph
Grammar of Graph Graphics
ggraph adapts the Grammar of Graphics from ggplot2 for network and graph visualizations. It integrates with tidygraph/igraph data structures, providing a wide range of geoms, layouts (e.g. hive plots, circle packing), and layering methods tailored to hierarchical or relational data. -
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PowerSimulationsDynamics.jl
Julia package to run Dynamic Power System simulations
PowerSimulationsDynamics.jl is a Julia package for power system modeling and simulation of Power Systems dynamics. -
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Surrogates.jl
Surrogate modeling and optimization for scientific machine learning
A surrogate model is an approximation method that mimics the behavior of a computationally expensive simulation. In more mathematical terms: suppose we are attempting to optimize a function f(p), but each calculation of f is very expensive. It may be the case we need to solve a PDE for each point or use advanced numerical linear algebra machinery, which is usually costly. The idea is then to develop a surrogate model g which approximates f by training on previous data collected from... -
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NonlinearSolve.jl
High-performance and differentiation-enabled nonlinear solvers
...The package includes its own high-performance nonlinear solvers which include the ability to swap out to fast direct and iterative linear solvers, along with the ability to use sparse automatic differentiation for Jacobian construction and Jacobian-vector products. NonlinearSolve.jl interfaces with other packages of the Julia ecosystem to make it easy to test alternative solver packages and pass small types to control algorithm swapping. It also interfaces with the ModelingToolkit.jl world of symbolic modeling to allow for automatically generating high-performance code. -
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Qualitis
Qualitis is a one-stop data quality management platform
...It is used to solve various data quality problems caused by data processing. Based on Spring Boot, Qualitis submits quality model task to Linkis platform. It provides functions such as data quality model construction, data quality model execution, data quality verification, reports of data quality generation and so on. At the same time, Qualitis provides enterprise-level features of financial-level resource isolation, management and access control. It is also guaranteed working well under high-concurrency, high-performance and high-availability scenarios. -
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F2
An elegant, interactive and flexible charting library for mobile
F2 is an out-of-the-box visualization engine focused on the mobile terminal, oriented to conventional statistical charts, perfectly supporting the H5 environment and compatible with multiple environments (Node, applet), complete graphics grammar theory, to meet your various visualization needs , professional mobile design guidelines to bring you the best mobile graphics experience. Best practices for moving side charts around design, performance and heterogeneous environments. Based on the grammar of graphics, Flexible construction of various charts (50+), complete components, covering various scenarios. Plugin, graphics, animation and interaction can be flexibly expanded and freely used. Covering business scenarios such as Ant membership, Alipay monthly bills, personal total assets, etc., it helps you understand your consumption data faster and better through visualization. -
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gusty
Making DAG construction easier
gusty allows you to control your Airflow DAGs, Task Groups, and Tasks with greater ease. gusty manages collections of tasks, represented as any number of YAML, Python, SQL, Jupyter Notebook, or R Markdown files. A directory of task files is instantly rendered into a DAG by passing a file path to gusty's create_dag function. gusty also manages dependencies (within one DAG) and external dependencies (dependencies on tasks in other DAGs) for each task file you define. All you have to do is... -
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nichenetr
NicheNet: predict active ligand-target links between interacting cells
nichenetr: the R implementation of the NicheNet method. The goal of NicheNet is to study intercellular communication from a computational perspective. NicheNet uses human or mouse gene expression data of interacting cells as input and combines this with a prior model that integrates existing knowledge on ligand-to-target signaling paths. This allows to predict ligand-receptor interactions that might drive gene expression changes in cells of interest. This model of prior information on... -
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InspectionPro X
Professional desktop tool for managing industrial inspection reports
...Key Features: Secure role-based login (Admin, Editor, Viewer) Reports table with filters (Discipline, Area, Tag, Result) Easy report creation/editing form CSV/Excel import & export with progress Charts dashboard for result analysis User management & custom headers Database switch, backup, publish Clickable links & color-coded results Perfect for oil & gas, petrochemical, construction industries. Supports tag tracking and HTML reports for sharing. Local storage (SQLite) — fully offline & private. -
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PlateEditor
PlateEditor, a free web application to work with multi-well plates
... - PlateEditor is available at this address: https://plateeditor.sourceforge.io - The source code is also available on GitHub, visit: https://github.com/vindelorme/PlateEditor More information about the source code and the API are available there (the wiki is still under construction, thanks for your patience!) For a list of recent updates, visit: https://sourceforge.net/p/plateeditor/wiki/Updates/ Hoping PlateEditor will make your life easier in the lab! If yes, please cite us: https://doi.org/10.1371/journal.pone.0252488 -
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DynamicalBilliards.jl
An easy-to-use, modular, extendable and absurdly fast Julia package
A Julia package for dynamical billiard systems in two dimensions. The goals of the package is to provide a flexible and intuitive framework for fast implementation of billiard systems of arbitrary construction. -
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CIERA
Crop Information Engine and Research Assistant
...It handles the genealogy, phenotypic and genotypic data of most modern breeding programs. It is distributed under the GNU General Public License, Version 3. ** This site is under construction, as of June 2024. *** -
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MS-Helios
MS-Helios: A Circos wrapper to visualize multi-omic datasets
...This remarkable progress poses a challenge to data analysis and visualization, requiring methods to reduce dimensionality and represent the data in a compact way. To provide a more holistic view, we recently introduced circular proteome maps (CPMs). However, the CPM construction requires prior data transformation and extensive knowledge of the Perl-based tool, Circos. We present MS-Helios, an easy to use command line tool with multiple built-in data processing functions, allowing non-expert users to construct CPMs or in general terms circular plots with a non-genomic basis. MS-Helios automatically generates data and configuration files to create high quality and publishable circular plots with Circos. -
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DBSolveOptimum
The software for systems biology/pharmacology modeling
DBSolveOptimum is a stand-alone software tool for the construction and analysis of mathematical models of biological systems. It is a succession and extension of DBSolve 5 and DBSolve 7, which were popular tools for systems biology. In addition to the capabilities of these software packages, DBSolveOptimum is implemented with new tools for extended data analysis and multiple simulations, which are important for simulation of virtual clinical trials and application of modern modeling techniques, like quantitative systems pharmacology, to problems arising in drug research and development. ... -
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TextGrapher
Text Content Grapher based on keyinfo extraction by NLP method
...The system then organizes these elements into connected nodes and relationships for visual inspection. Generated results are saved as an HTML graph that can be opened in a browser. The repository includes parsing, keyword extraction, graph construction, and visualization scripts. Example use cases cover news and public-event narratives where key actors and actions are difficult to scan quickly. The project is an experimental NLP demonstration, and its accuracy depends on the quality of entity recognition and information extraction. -
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GAPE
proteogenomic analysis software
...This software allows concurrent querying of proteomic and genomic databases to refining the genome and proteome annotations comprehensively. This includes MS data and database construction, database searches, FDR calculations, statistical result integration, validation of annotated genes, identification of previously unidentified genes, protein level identification of alternative spliced variants and SAAV, biological interpretation, and global PTM discovery. -
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Py3DN
Morphometric analysis and visualization of the 3D structure of neurons
Py3DN, is an open-source solution providing innovative tools to analyze 3D data collected with the widely used commercial system Neurolucida (MBF). It allows the construction of mathematical representations of neuronal topology, visualization and a variety of morphometric analysis on the neuronal structures. Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses. The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. ... -
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NanoCap
Carbon Fullerene and Capped Nanotube Generator
NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code. -
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CARuler
qwt draggable graph rulers
CARuler provides vertical and horizontal ruler classes designed to work with QwtPlot. You can create as many rulers as you like. During construction, the ruler gets attached to the plot. Thus, the plot takes ownership of all rulers known to it. Rulers are draggable and emit a signal when its position changes. There is a built-in editing facility for ruler attributes in the form of a right click menu. It is also possible, through the right click menu, to lock any ruler in its current position or a specify a position in which it should be locked. -
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BriPy
A BRIC-seq data analysis package written in Python.
...It employs metabolic labeling by BrU of newly synthesized RNAs to chase chronological decreases of BrU-labeled RNA (Pulse-chase labeling), followed by immunoprecipitation with antibody for BrU, construction of cRNA library for High-throughput sequencing and computational data analysis. -What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). ... -
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imDEV
Tools for multivariate data visualization, exploration and analysis.
You may also like some newer work: http://createdatasol.com/ Project imDEV is an application of RExcel, which seamlessly integrates Excel and R for tasks focused on multivariate data visualization, exploration, and analysis. Interactive modules for dimensional reduction (imPCA), prediction (imPLS), feature selection, analysis of correlation (imCorrelations) and generation of networked structures (imGraph) provide an integrated environment for systems level analysis of multivariate data.
