Showing 20 open source projects for "main"

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  • 1
    Apache Doris

    Apache Doris

    MPP-based interactive SQL data warehousing for reporting and analysis

    ...Apache Doris can meet various data analysis demands, including history data reports, real-time data analysis, interactive data analysis, and exploratory data analysis. Make your data analysis easier! Support standard SQL language, compatible with MySQL protocol. The main advantages of Doris are the simplicity (of developing, deploying and using) and meeting many data serving requirements in a single system. Doris mainly integrates the technology of Google Mesa and Apache Impala, and it is based on a column-oriented storage engine and can communicate by MySQL client.
    Downloads: 10 This Week
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  • 2
    Cookiecutter Data Science

    Cookiecutter Data Science

    Project structure for doing and sharing data science work

    A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. When we think about data analysis, we often think just about the resulting reports, insights, or visualizations. While these end products are generally the main event, it's easy to focus on making the products look nice and ignore the quality of the code that generates them. Because these end products are created programmatically, code quality is still important! And we're not talking about bikeshedding the indentation aesthetics or pedantic formatting standards, ultimately, data science code quality is about correctness and reproducibility. ...
    Downloads: 0 This Week
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  • 3
    qvge

    qvge

    Qt Visual Graph Editor

    qvge is a multiplatform graph editor written in C++/Qt. Its main goal is to make possible visually edit two-dimensional graphs in a simple and intuitive way. Please note that qvge is not a replacement for such a software like Gephi, Graphvis, Dot, yEd, Dia and so on. It is neither a tool for "big data analysis" nor a math application. It is really just a simple graph editor :)
    Downloads: 3 This Week
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  • 4
    CT4AM

    CT4AM

    Tools for 3D image analysis of additively manufactured parts

    ...It is written in C++ and provides small, problem-specific applications for viewing, analysing and visualising of volumetric data from micro-CT scans with respect to the complex process parameters and characteristics of additive manufacturing. Moreover, data analysis and processing of G-code are key assets of the project. The main objective is not to provide yet another complex application for volume data visualization and medical image processing. Instead, CT4AM is a collection of small and simple apps that have already been successfully used to solve various problems in materials science and process visualization. You can either execute these tools directly or use their source codes to develop your own application for toolpath analysis or correlation.
    Downloads: 1 This Week
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  • 5
    QtiPlot
    QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
    Downloads: 21 This Week
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  • 6
    OME-3DR

    OME-3DR

    3D cell reconstruction and quantitative analysis based on OME data

    For big OME data analysis, we integrate commonly used quantitative methods, describe our novel strategies to quantify and analyze biological markers related to the cell or organelle spatial-coordinate model, and present open-source OME-3-Dimensional Reconstruction (OME-3DR), a flexible, programmable and batch-oriented tool based on OME data, for reconstructing 3-dimensional (3D) spatial conformations and conducting further analyses, such as the identification, counting, localization and tracking of bio-imaging markers, calculation of model-contour parameters for association analyses, establishing spatial-coordinate system, 3D co-localization analyses and so on. OME-3DR is well modularized (for automation, three main menus integrate hundreds of sub-functions), easy to use and ingenious; indeed, after setting the corresponding parameters, batch processing is relatively straightforward when beginning the 3D model reconstruction...
    Downloads: 0 This Week
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  • 7

    An introduction to Data Analysis in R

    A guide for learning the basic tools on data anaylisis with R

    ...This repository holds the necessary data sets for the book "An introduction to Data Analysis in R", to be published by Springer series Use R!. The book can be purchased in XXX. The book is meant as an introductory guide to manipulate data sets in the Big Data paradigm. One of the main goals of this book is to take the analyst from the very first moment when she/he contacts with data to the final conclusion and presentation of results of analysis. We take into account the variety of fields where data analysis occurs nowadays. We pay special attention to the different ways to obtain data and how to make it manageable before starting the analysis. ...
    Downloads: 0 This Week
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  • 8

    TaBS-Pipe

    Targeted Bisulfite Sequencing Data Analysis Pipeline v1.0.2

    ...TaBSAP is a pipeline to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step and enables a researcher to analyze the methylation levels of their samples straight away. It's main features are: -Bisulfite mapping and methylation calling in one single step -Supports single-end read alignments -Alignment seed length, number of mismatches etc. are adjustable -The output gives heatmap with categories.
    Downloads: 0 This Week
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  • 9
    Central Proteomics Facilities Pipeline

    Central Proteomics Facilities Pipeline

    A data analysis pipeline for shotgun mass-spectrometry proteomics.

    .... == Project Status - Updated January 3rd 2019 == CPFP has not been actively developed since 2014, when I left the proteomics group at UTSW. To access up-to-date algorithms for the analysis of proteomics data, other tools would now be preferred. However: * Limited fixes have been made on the main master branch by Phil Charles at the University of Oxford. * As of 2019, limited maintenance is being carried out by myself (now in the BioHPC high performance computing group at UTSW), to allow CPFP to install and run on RHEL 7 / CentOS 7, with updated TPP 5.1.0 and search tools. This updated code can be found in the utsw-biohpc branch of the git repository, and may become a 2.2.0 release if time and testing allows. -- David Trudgian - 2019/01/03
    Downloads: 0 This Week
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  • 10
    TXM-Wizard
    Toolbox for handling X-ray transmission image data collected using the Xradia TXM system. We are constantly updating the code to implement other file formats as well - suggestions are welcome. Main articles: -) TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 19, 281-287. (2012) http://scripts.iucr.org/cgi-bin/paper_yard?hf5192 -) 3D elemental sensitive imaging using transmission X-ray microscopy, Analytical and Bioanalytical Chemistry, Volume 404, Issue 5, pp 1297-1301 (2012) http://link.springer.com/article/10.1007%2Fs00216-012-5818-9 -) Three-dimensional imaging of chemical phase transformations at the nanoscale with full-field transmission X-ray microscopy, Journal of Synchrotron Radiation, 18, 773-781. (2011) http://scripts.iucr.org/cgi-bin/paper?...
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    Downloads: 31 This Week
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  • 11

    hdxworkbench

    HD Exchange Data analysis

    ...BUILDING UPON THE EXPERIENCE FROM DEVELOPMENT OF THE DEUTERATOR AND HD DESKTOP, IT INTEGRATES TOOLS FOR DATA EXTRACTION WITH VISUALIZATION COMPONENTS WITHIN A SINGLE DESKTOP APPLICATION. THE SOFTWARE HAS BEEN DESIGNED TO BE A COMPREHENSIVE SOLUTION, AND EMPHASIS WAS PLACED ON ACHIEVING THREE MAIN GOALS OF INCREASED ANALYSIS SPEED; USER-FRIENDLY GRAPHIC INTERFACE; AND STRONG SUPPORT FOR LARGE HDX DATA SETS. THE SOFTWARE IS CURRENTLY LIMITED TO THERMO and WATERS INSTRUMENT FILE TYPES, RUNS ON THE WINDOWS 64 BIT PLATFORM, AND IS FREELY AVAILABLE FOR NON-COMMERCIAL PURPOSES.
    Downloads: 0 This Week
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  • 12

    X-SOCS

    X-ray Strain Orientation Calculation Software

    ...Vincent, M.I. Richard, G. Chahine), follow the instruction in the following link: https://gitlab.esrf.fr/kmap/xsocs You can find on youtube video tutorials explaining the main steps to follow for a standard KMAP data analysis. In the folder XSOCS_tutorials_data of the Files tab, you can download the dataset used in the tutorials. Make sure to read the readme file.
    Downloads: 0 This Week
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  • 13
    Open Cezeri Library

    Open Cezeri Library

    Effective Linear Algebra and Computer Vision Library with JAVA

    ...It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1- Vision: It can access web cams, imaging source industrial cameras for manuel settings and advanced issues. Studies on accesing Leapmotion and Kinect is still under-development. 2- Machine learning: It uses Weka Software tool and some personel coded ML algorithms 3- CMatrix: Special matrix library called as CMatrix meaning Cezeri Maztrix Class. ...
    Downloads: 0 This Week
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  • 14

    ckon

    automatic build tool for ROOT data analysis software

    ckon is a C++ program/tool which automatically takes care of compilation, dictionary generation and linking of programs and libraries developed for data analyses within the CERN ROOT analysis framework. This includes parsing include headers to figure out which libraries the main programs need to be linked to. It uses automake/autoconf to be platform independent and GNU install compliant. In addition, m4 macros are automatically downloaded and the according compiler flags included based on a list of boost libraries provided in the config file.
    Downloads: 0 This Week
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  • 15

    xSonify

    Java-based sonification data analysis

    ...Alternatives include Sonification Sandbox <http://sonify.psych.gatech.edu/research/>, MathTrax and Earth Plus <http://prime.jsc.nasa.gov/>, Sonifyer <http://www.sonifyer.org> and SoniPy <http://sourceforge.net/projects/sonipy/>. More at the main forum for sonification, ICAD <http://icad.org>
    Downloads: 0 This Week
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  • 16
    JProGraM (PRObabilistic GRAphical Models in Java) is a statistical machine learning library. It supports statistical modeling and data analysis along three main directions: (1) probabilistic graphical models (Bayesian networks, Markov random fields, dependency networks, hybrid random fields); (2) parametric, semiparametric, and nonparametric density estimation (Gaussian models, nonparanormal estimators, Parzen windows, Nadaraya-Watson estimator); (3) generative models for random networks (small-world, scale-free, exponential random graphs, Fiedler random fields), subgraph sampling algorithms (random walk, snowball, etc.), and spectral decomposition.
    Downloads: 0 This Week
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  • 17
    MicrobeTracker
    A MATLAB-based software package for microbiological research designed to detect and outline bacterial cells in microscopy images and to analyze fluorescence signal inside them.
    Downloads: 0 This Week
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  • 18
    VISPA is a novel development environment for high energy physics analyses, based on a combination of graphical and textual steering. The main goal of VISPA is to support users in prototyping, performing, and verifying a data analysis of any complexity.
    Downloads: 0 This Week
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  • 19
    Open Source Development of (SmartGrid) Data Analysis Platform based on OpenPDC and Cloud Computing Technology. * Source Codes - http://nephee.sourceforge.net, Main Project (Info, Planning, News) , http://nephee.or.kr, http://twitter.com/nepheer
    Downloads: 0 This Week
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  • 20
    While resting-state fMRI is drawing more and more attention, there has not been a software for its data analysis. Based on MATLAB, we developed a package named REST. Currently REST has three main functions: function connectivity, ReHo and ALFF.
    Downloads: 0 This Week
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