A pipeline to analyze the data obtained from targeted bisulfite sequencing through the ion-torrent platform.

TaBSAP is a pipeline to map bisulfite treated sequencing reads to a genome of interest and perform methylation calls in a single step and enables a researcher to analyze the methylation levels of their samples straight away. It's main features are:

-Bisulfite mapping and methylation calling in one single step

-Supports single-end read alignments

-Alignment seed length, number of mismatches etc. are adjustable

-The output gives heatmap with categories.

Features

  • Bisulfite Sequencing data analysis
  • Single end read aligner
  • generates heatmap

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Categories

Data Analytics

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Registered

2019-03-27
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