Central Proteomics Facilities Pipeline download

CPFP provides a pipeline for the analysis of MS/MS proteomic data, targeted at the needs of central proteomics facilities.

== Project Status - Updated January 3rd 2019 ==

CPFP has not been actively developed since 2014, when I left the proteomics group at UTSW. To access up-to-date algorithms for the analysis of proteomics data, other tools would now be preferred. However:

* Limited fixes have been made on the main master branch by Phil Charles at the University of Oxford.

* As of 2019, limited maintenance is being carried out by myself (now in the BioHPC high performance computing group at UTSW), to allow CPFP to install and run on RHEL 7 / CentOS 7, with updated TPP 5.1.0 and search tools. This updated code can be found in the utsw-biohpc branch of the git repository, and may become a 2.2.0 release if time and testing allows.

-- David Trudgian - 2019/01/03

Project Samples

Project Activity

See All Activity >

Follow Central Proteomics Facilities Pipeline

Central Proteomics Facilities Pipeline Web Site

Other Useful Business Software

Ship Agents Faster

Transform your applications and workflows into powerful agentic systems at global scale.

Gemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.

Get Started Free

Additional Project Details

Registered

2009-10-26

Similar Business Software

Google Cloud BigQuery

BigQuery is a serverless, multicloud data warehouse that simplifies the process of working with all types of data so you can focus on getting valuable business insights quickly. At the core of Google’s data cloud, BigQuery allows you to simplify data integration, cost effectively and securely...

See Software
icCube

icCube is a Swiss embeddable analytics solution designed for B2B SaaS product and development teams to deeply embed analytic capabilities inside their applications. Dashboards will seamlessly blend into the SaaS solution’s UI and UX experience, while resting on top of icCube’s robust...

See Software
DataBuck

DataBuck is an AI-powered data validation platform that automates risk detection across dynamic, high-volume, and evolving data environments. DataBuck empowers your teams to: ✅ Enhance trust in analytics and reports, ensuring they are built on accurate and reliable data. ✅ Reduce maintenance...

See Software
Scoop Analytics

Scoop is the best thing to happen to data since the spreadsheet. Unlock all of your business data in an instant. Scoop lets you combine and analyze data from anywhere to power better decisions. Forget all the tools and resources it takes to get answers out of your data. Scoop takes you from data...

See Software
Megaladata

Megaladata is the fastest low-code platform for advanced analytics, enabling business users to design and run end-to-end data workflows—ù, from ETL to ML, without coding or IT support. With visual design tools and ready-made components, it simplifies data integration, cleansing, and deep...

See Software
HappyLoop

HappyLoop is an AI-driven platform designed to enhance SaaS applications by providing users with real-time, actionable data insights through a conversational interface. By integrating HappyLoop, SaaS providers can offer their clients instant data analysis, enabling faster decision-making and...

See Software