Search Results for "java swing components"
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Showing 28 open source projects for "java swing components"
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123VCF
An Intuitive and Efficient Tool for VCF file filtration
123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC... -
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Amazon Kinesis Flink Connectors
Contains various Apache Flink connectors to connect to AWS data
...The Apache Flink DataStream API programming model is based on two components. -
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Log4jScanner
A log4j vulnerability filesystem scanner and Go package
log4jscanner is a filesystem scanner and Go package that helps organizations quickly identify vulnerable Log4j components inside JARs and shaded dependencies. Instead of probing networks, it walks directories and archives, including nested JARs, to find version fingerprints and risky classes associated with the Log4Shell family of issues. The focus on static analysis makes it suitable for container images, build artifacts, and offline systems where active scanning isn’t feasible. Clear,... -
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Mass-Up
MALDI-TOF data analysis tool
Mass-Up is an Open-Source mass spectrometry utility for proteomics designed to support the preprocessing and analysis of MALDI-TOF mass spectrometry data. Mass-Up includes several tools and operations to load, preprocess and analyze MALDI-TOF data. -
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PMM-Lab
Predictive Microbial Modeling plug-in for KNIME
PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public... -
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Ship Lock Scheduling
Scheduling lockages at ship locks with several parallel lock chambers
This Java software includes algorithms of combinatorical optimization for the NP-hard offline ship lock scheduling problem. Solutions and performed computations can be displayed graphically. Besides, there is a framework for generating test instances and running these in parallel, as well as R/JGR code for statistical evaluation. Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding... -
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Bamformatics
Toolkit and GUI for sequencing data analysis
The Bamformatics project aims to provide a coherent and consistent approach to analysis of high-throughput sequencing data. Its toolkit includes, among others, programs to identify variants and to compute various types genomic tracks. It also provides a graphical user interface to facilitate general bioinformatic workflows. The project wiki contains further details. -
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Open Cezeri Library
Effective Linear Algebra and Computer Vision Library with JAVA
OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1-... -
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IAP.G2P
IAP - the Integrated Analysis Pipeline
The Integrated Analysis Platform (IAP) has been designed and developed to support the analysis of large-scale image data sets of different camera systems. It aims in bridging different data domains and in integrating different approaches to data analysis and post-processing. -
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SCaVis
Scientific Computation and Visualization Environment
SCaVis is an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with Java and a number of scripting languages: Jython (Python), Groovy, JRuby, BeanShell. SCaVis can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential... -
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PalOOCa OpenOffice Extension for Palo
palo olap open office calc plugin for data analysis
The PalOOCa Project offers a fast, flexible and intuitive Office-based Business Intelligence solution based on Jedox. It provides an extension for OpenOffice.org Calc which allows both, read and write, access to data from within the Jedox OLAP Server via Calc. If used together with the Open Source Jedox/Palo OLAP Server it completes the Open Source MOLAP-Stack for Business Intelligence. Additionally to Jedox OLAP it is also (read-only) compatible to (almost) all OLAP servers supporting... -
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xSonify
Java-based sonification data analysis
xSonify is a Java-based sonification data analysis prototype for displaying science data as sounds, with an emphasis on supporting visually-impaired researchers. Alternatives include Sonification Sandbox <http://sonify.psych.gatech.edu/research/>, MathTrax and Earth Plus <http://prime.jsc.nasa.gov/>, Sonifyer <http://www.sonifyer.org> and SoniPy <http://sourceforge.net/projects/sonipy/>. More at the main forum for sonification, ICAD <http://icad.org> -
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Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
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jFox Journal
Trading journal for Currency,Stock,Commodity traders
jFox Trading Journal is software developed mainly for currency traders,it provides advanced data analysis to improve traders ability to reach higher profits and eliminate losses.jFox keeps your data in one place.To access or modify any of your data jFox provide simple user friendly GUI.By generating graphs and statistics automaticly,user only needs to provide his data to have full overview over his trades and trading performance. -
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locusvu
Tool for genomics;automates data retrieval from db;enables workflows
LocusVu is a novel Java based software tool that accepts a list of genomic loci (positions on the chromosome) as input and automates fetching of related information (cytogenetic band, gene name, OMIM data etc.) from public databases such as the UCSC genome browser database. It then enables multiple workflows on the retrieved results, like comparing multiple datasets (comparative genomics), viewing neighboring genes for a loci from within the tool itself, or graphically representing these... -
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feed4weka is an open library that enriches weka (http://www.cs.waikato.ac.nz/ml/weka/), an open source project for data analysis. It integrates new classification and clustering algorithms, and adds the coclustering and outlier detection frameworks
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Compositional data analysis, following the approach introduced by John Aitchison, is not straightforward to use with standard statistical packages. CoDaPack provides a software capable of using the Aitchison methodology.
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jHepWork
jHepWork was a name of the DataMelt program in 2005-20013
jHepWork (2005-2013) was an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with the Jython (Python) scripting language. Currently the project is known under the name DataMelt (https://datamelt.org) -
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PL-DAS
Port Logistics Data Analysis System using Process Mining
This project is for analyzing operational data from container terminal, applying process mining and port logistics domain knowledge. This project is found by Total Soft Bank, Ltd. and Busan National University, based on ProM framework (http://www.promtools.org) which is also an open source project. This project is sponsored by NIPA (National IT Industry Promotion Agency), Korea. -
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DbViz produces plots of data contained in MySQL databases. Data can be viewed by looking at line graphs, xy scatter plots, and bar graphs. This greatly simplifies data analysis.
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The EDAM ENCHILADA - The Exploratory Data Analysis and Management Project's Environmental Chemistry Data Processing and Mining Application.
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GmanDA is a GPL software for performing qualitative data analysis on mailing-lists and mboxes. It was developed to ease the work with large scale mailing-list archives taken from Gmane.org
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GSCope3 performs microarray data analysis to find correlations between BLSOM clusters and any form of omic knowledge expressed in OSML. Includes example metabolic pathway, gene ontology, genome position, transcription and PPI knowledge in OSML format.
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The Canopy project is an initiative to merge and expand the functionality of Perl-speaks-NONMEM (PsN), Census, Xpose and PopED. The goal is to produce a coherent, inclusive and convenient platform for pharmacometric data analysis.
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LMS Tools is a set of tools and libraries for administrators and users of learning management systems to perform, for example, portal integration, LMS management or usage data analysis.
