Open Source Data Analytics Tools - Page 13
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R Hadoop for Big Data
Download Free Associated R open source script files for big data analy
Download Free Associated R open source script files for big data analysis with Hadoop and R These are R script source file from Ram Venkat from a past Meetup we did at http://www.meetup.com/R-Matlab-Users/events/85160532/ Also, there is a long video and Powerpoint presentation slide PDF with R files at: http://quantlabs.net/blog/2012/11/how-to-use-hadoop-and-r-for-big-data-parallel-processing-free-download-pdf/ Download source files from http://quantlabs.net/blog/2012/11/download-free-associated-r-open-source-script-files-for-big-data-analysis-with-hadoop-and-r-rstats-hadoop/ -
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A collection of code, bundled into a single R package, to perform several aspects of data management, image pre-processing, data analysis and statistical inference related to the quantitative analysis of dynamic contrast-enhanced MRI (DCE-MRI).
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RATH
Automated Data Analysis Software, Open Source Augmented Analytic BI
RATH is beyond an open-source alternative to Data Analysis and Visualization tools such as Tableau. It automates your Exploratory Data Analysis workflow with an Augmented Analytic engine by discovering patterns, insights, causals and presents those insights with powerful auto-generated multi-dimensional data visualization. -
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RCFPD
Random Collection of Functions for Proteomics Data Analysis
An R package for distribution of data analysis functionality used by the Proteomics Core at Weill Cornell Medical College in Qatar. -
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ROOTSNNS is a set of C++ classes which allows one to use the Stuttgart Neural Network Simulator kernel (ansi-C) within the ROOT, a data analysis package. Multiple ANNs can be built, trained, and tested, while results and ANN performance can be saved.
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RSS Atom Feed Analytics With MapReduce
This is a data analytics project for RSS feeds using hadoop MapReduce
This project accepts the output of jatomrss project as the input. It applies the MR logic on the same to perform the analytics -
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RStatServer is a system for quickly developing and deploying web applications that integrate statistical computations and graphics. It is built using the Zope web application develeopment system and the open-source statistical data analysis environment R
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RUCKUS-DATA-STUDIO
RUCKUS Analytics - Data Studio Dashboard Repository
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RadiationHelper
Alpha, Beta, Gamma measurements and Nuclide exposure
RadiationHelper is a data analysis tool for : 1. gross alpha and beta radiation measurement and detector calibration using experimental data (counts acquired by alpha-beta devices). 2. gamma spectroscopy measurements and detector calibration using experimental data (spectra acquired by acquisition software such as Assayer, Gamma Vision, Maestro) 3. gross alpha,beta, gamma detector efficiencies and gamma peak efficiency can be theoretical computed using Monte-Carlo simulation technique for radiation transport (based on EGSnrc toolkit) 4.dose assessment in human body exposed to radiations from nuclides in several common scenarios such as air exposure, water submersion, ground surface, internal ingestion or inhalation. 5. quick dosimetry and shielding computations. It is platform independent (written entirely in Java). Source code included in jar files! Also, available on GitHub: https://github.com/ZiliasTheSaint/RadiationHelper.git Checkout for dependent modules! -
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Random Bits Regression
Random Bits Regression is a strong general predictor.
We proposed an accurate, robust and fast general predictor (RBR) for regression and classification in big data era. The application of this method is very broad, from science to industry, finance and health. The accuracy and robustness improvement of our method over existing method could bring huge benefits in some critical applications. For example, natural disaster prediction, stock price prediction, personal/population disease prediction. The fast-speed nature of our method not only allows big data analysis but also enables real-time recognition and predictions. The RBR framework also hints the mechanism of brain function and leads to a "wide learning" hypothesis. We believe that this method will make a great impact and enable many downstream applications. -
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Reproducible-research
A Reproducible Data Analysis Workflow with R Markdown, Git, Make, etc.
In this tutorial, we describe a workflow to ensure long-term reproducibility of R-based data analyses. The workflow leverages established tools and practices from software engineering. It combines the benefits of various open-source software tools including R Markdown, Git, Make, and Docker, whose interplay ensures seamless integration of version management, dynamic report generation conforming to various journal styles, and full cross-platform and long-term computational reproducibility. The workflow ensures meeting the primary goals that 1) the reporting of statistical results is consistent with the actual statistical results (dynamic report generation), 2) the analysis exactly reproduces at a later point in time even if the computing platform or software is changed (computational reproducibility), and 3) changes at any time (during development and post-publication) are tracked, tagged, and documented while earlier versions of both data and code remain accessible. -
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SASA Tool
SWATH-Auto System Analyzer Tool, SASA Tool
SWATH-Auto System Analyzer Tool, SASA Tool, is a novel SWATH platform for non-targeted metabolomics data analysis with an accurate mass spectral library for metabolite identification using SWATH acquisition mode. -
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A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
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SCiDA Pro
Program for solar cell production data analysis
The purpose of the SCiDA Pro program is to help with processing solar cell production data. It has the following features: - Able to handle large data sets in a fast way (e.g. plotting 100k cell data takes a few seconds) - Easy data filtering - Easy generation of a data summary report - Extensive data plotting features - Cross-platform (Windows/Linux/MacOS) - Supports multiple languages -
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SFrame is a C++ framework built around the ROOT libraries for analysing particle physics data. It gives a very high performance for processing data, by allowing the user to run his/her code on a distributed farm of machines.
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SHORE is a Next Generation Sequencing data analysis suite. Please find the manual at http://shore.sourceforge.net/wiki
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SNP-Analyzer
SNP-Analyzer
SNP-Analyzer is a tool for the efficient Analysis and management of Affymetrix SNP DMET Data analysis -
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SPRITE
Parallel SNP detection pipeline
SPRITE is an open-source software package providing a parallel implementation of the Single Nucleotide Polymorphisms (SNP) detection genomic data analysis workflow. It consists of three tools: PRUNE for read alignment, SAMPA for intermediate file processing, and PARSNIP for parallel SNP calling. -
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SafeUtils
110+ developer tools as native MacOS, Linux & Windows desktop apps.
Tools: https://safeutils.com/barcode-generator https://safeutils.com/color-picker https://safeutils.com/qr-code-generator https://safeutils.com/qr-code-scanner https://safeutils.com/word-counter https://safeutils.com/base-64-decoder https://safeutils.com/diff-checker https://safeutils.com/hex-to-ascii https://safeutils.com/json-formatter https://safeutils.com/lorem-ipsum-generator https://safeutils.com/random-generator https://safeutils.com/time-converter https://safeutils.com/xml-formatter https://safeutils.com/ascii-to-binary https://safeutils.com/ascii-to-hex https://safeutils.com/base-64-encoder https://safeutils.com/binary-to-ascii https://safeutils.com/case-converter https://safeutils.com/csv-to-json https://safeutils.com/decimal-to-ascii https://safeutils.com/html-formatter https://safeutils.com/html-preview https://safeutils.com/html-to-markdown https://safeutils.com/id-generator https://safeutils.com/json-to-csv https://safeutils.com/json-to-xml -
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SampleSpecificDBGenerator
Generates custom UniProt-XML databases from RNA-Seq data
SampleSpecificDBGenerator is a program that takes RNA sequencing data analysis results and translates them into protein database entries that are appended to a UniProt-XML file. This XML is condensed, meaning that much of the extraneous author information in UniProt-XMLs is removed for faster search times in Morpheus. Please cite http://pubs.acs.org/doi/abs/10.1021/acs.jproteome.5b00817. -
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Savuka-VirtualBox
Virtual Box VDI of SliTaz Linux with Savuka installed and configured
Savuka global analysis software (www.osmanbilsel.net) is installed and configured in a light version of SliTaz linux (www.SliTaz.org). root name: root root password: root username: tux password: root Instructions: -Download and install 7zip (www.7-zip.org) -Extract files to HDD -Install included VirtualBox (not tested on other versions, but shouldn't matter) -Within VirtualBox make a new machine ----Machine/New --------Name: Savuka / Type: Linux / Version: Other Linux (32-bit) --------1024MB RAM -------- Use Existing virtual drive (point to extracted Savuka.vdi) ---- Machine/Settigns/Display: set video memory to 50 MB, enable 2D and 3D acceleration ---- Machine/Settings/Shared Folders: Create new machine folder. Point to any data directory, folder name: DATA, select Auto-mount. Note: "Folder name" must be 'DATA' in all caps to link on boot Thats it! More Info: www.osmanbilsel.net www.paulnobrega.net -
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SODA is short for School Online Data Analysis. The project's aim is to simplify the process of undertaking meaningful data analysis at both the departmental and whole school curriculum levels.
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Ship Lock Scheduling
Scheduling lockages at ship locks with several parallel lock chambers
This Java software includes algorithms of combinatorical optimization for the NP-hard offline ship lock scheduling problem. Solutions and performed computations can be displayed graphically. Besides, there is a framework for generating test instances and running these in parallel, as well as R/JGR code for statistical evaluation. Some tools for estimating the quality of calculated solutions will be further improved. Initially the software was developed within a project of TU Berlin regarding the Kiel Canal. See project wiki for conditions that should be met by applications. -
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Short-3DXRD
Data analysis package for 3D-XRD
Please contact the authors by sending a message (via https://sourceforge.net/users/rmhuizenga). We will be glad to send you the programs.
