Search Results for "linux command" - Page 52
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5268 projects for "linux command" with 1 filter applied:
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The General Hidden Markov Model Library (GHMM) is a C library with additional Python bindings implementing a wide range of types of Hidden Markov Models and algorithms: discrete, continous emissions, basic training, HMM clustering, HMM mixtures.
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NodeBrain
Rule Engine for State and Event Monitoring
NodeBrain is a rule engine for construction of state and event monitoring applications. It interacts with other monitoring components to perform simple element state monitoring or complex event correlation based on user specified rules. It is extended through the development of node modules (plug-ins) using NodeBrain's C API, and servants (programs written in any language) that interact with the rule engine via stdin, stdout, and stderr. The package includes a small set of plug-in modules to... -
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SNMP proxy forwarder
Highly configurable SNMPv1/v2c/v3 application-level proxy
Project moved to GitHub: https://github.com/etingof/snmpfwd -
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Mathpad
A Python based command line math utility.
Mathpad is a command line utility. It will later have a GUI, but not at this time. -
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DocumentBurster
Report Delivery. Report Distribution. Report Bursting. Email & FTP
DocumentBurster is a powerful report delivery software which can break up reports such as invoices, statements, purchase orders, commissions reports or dunning letters in order to distribute relevant parts to each of your clients, subscribers, partners or vendors. DocumentBurster can process PDF and Microsoft Excel reports and will naturally complement and extend your current business intelligence solution. Report bursting software which works with any reporting software including... -
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C/C++ to Squirrel Compiler
meta compiler to transfer C/C++ classes etc. to Squirrel Lang
a compiler for a meta language to describe C/C++ classes and functions to integrate into the Squirrel Scripting Language. Supports classes with properties (via getter/setter) -
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Program jobman (Job Manager) glues executables written in different languages according to a given flow. The program can run executables with arguments in parallel (multiprocessed) or in loop or in any combination of them.
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OFormsCI
Continuous Integration for Oracle Forms/Reports Fusion Middleware
OFormsCI is a set of tools to form a complete tool chain for continuous integration with Git, Jenkins, Oracle Forms/Reports and WebLogic server. -
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bsclient
An interactive FTP-like command-line BaseSpace download client
bsclient is an interactive text-based client for browsing and downloading files from Illumina BaseSpace. It has a simple interface simliar to FTP and can be used to easily download files onto a remote server or in any situation when the web-based interface is not accessible or desirable. Please note that current development on this project has moved to GitHub: https://github.com/jvolkening/bsclient -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters.
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VarScan
Variant detection in next-generation sequencing data
Variant detection in massively parallel sequencing. For one sample, calls SNPs, indels, and consensus genotypes. For tumor-normal pairs, further classifies each variant as Germline, Somatic, or LOH, and also detects somatic copy number changes. THE LATEST VERSION IS AVAILABLE ON GITHUB -
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pycrc
CRC C source generator
pycrc is an easy to use CRC (cyclic redundancy check) calculator and C source code generator. The generated source code can be optimized for simplicity, speed or space. pycrc contains a long parameter list of common CRC models. The program is self contained and does not require installation. Apart from a python installation, it does not require other libraries to be installed. -
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Premake
On GitHub now!
We moved to GitHub. Please look at the new homepage for an accurate description of the project. -
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The `fmtt` formatter
A plain text formatter for typescripts.
Formats plain text and improves upon the classical fmt tool. Well suited as a reformatting filter for mails, reports, README files and all kinds of structured typescripts. Features include: - Knows about section headings, numbered item lists, unordered lists, paragraph numbers. - Can automatically renumber sections, items, paragraphs. - Handles no-break space (NBSP) and soft hyphen (SHY) sensible. - Uses Unicode internally, reads and writes 8-bit oder UTF-8 encoded... -
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A set of tools for working with VCF files, such as those generated by the 1000 Genomes Project. This project is migrating to github: https://vcftools.github.io/
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LogDistiller is a logfile merge and sort tool. Log content is classified according to rules configured in an XML file. Classification results go into reports, which are published : simply stored in a file, sent by mail, or even added to a news feed.
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Dibbler - a portable DHCPv6
Portable DHCPv6 implementation
Dibbler is a portable DHCPv6 implementation. Is supports stateful (i.e. IPv6 address granting) as well as stateless (i.e. option granting) autoconfiguration for IPv6. Linux 2.4/2.6/3.0, Windows XP/2003/Vista/7/8 (experimental for NT4/2000), Mac OS X, FreeBSD, NetBSD and OpenBSD. -
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ChkSem
A static source code analyser for Fortran 90 and C++
ChkSem is a static Fortran 90 and C++ source code analyser. Fortran codes are analysed to find potential problems and dead code. This project allows ( for the moment ) to find useless includes and to find missing direct includes for helping programmers to clean C++ codes. This can potentially reduce building time from small programs to huge solutions. This tool is not finalized and new versions will follow, with a GUI with even more features. The project is written in Java to... -
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pyhrol
Bridge between C++ and Python
Dynamic C++ library for simplification of binding C++ projects to Python. Supports argument overloading. Automatically generates help on method signatures, including default values. Automatically generates list of named parameters. Supports primary Python protocols: Number, Sequence, Mapping, Iterator Protocol. Includes more than 40 code examples. CMake driven. Supports Python 2.x. Does not support Python 3.x (planned). Tested on Linux Ubuntu 13.X 32/64 with Python 2.7.X -
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rainbow
short reads clustering and local assembly
Efficient tool for clustering and assembling short reads, especially for RAD. -
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This page is abandoned. Head over to https://flow.neos.io/ or https://neos.io/ for further details!
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OpenAutonomy Demos
Demo code for use with OpenAutonomy
A grab-bag of demo programs and stand-alone tools meant to be connected to an OpenAutonomy identity via pre-trusted authentication tokens. -
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Yet Another Cron4J
a simple cron scheduler for java
A java library for easily scheduling commands using cron expressions. Uses the cron expression parser from Quartz and the HashWheelTimer from netty. Handles DST conflicts, command exceptions, overlapping execution. -
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RAW to BMP
Converts RAW files to BMP ones
It always frustrated me that almost NO image tool can handle RAW image files. That's why I built my own! It's nothing fancy, it takes files from the cmd-line and asks for the images' dimensions. I programmed it in less than 10 minutes :-p