Former home of the Virtual Cell platform (VCell), see http://vcell.org
A Genomic LIMS and Data Repository
CARGO - Compressed ARchival for GenOmics
Multiscale Neuroscience and Systems Biology Simulator
PromKappa 2.0 (Java source code and bin)
ChIP-RNA-sequencing-processing (ChIP-RNA-seqPRO)
Madeline 2.0 Pedigree Drawing Engine (PDE)
Portable Framework for the Parallel Execution of Short Read Aligners
CUDAlign is a tool that aligns huge DNA sequences in CUDA capable GPUs
C++ and Python code for simulating RNA virus replication
Differential Expression Analysis for Pathways
A lot of fish in a shoal, in a gigantic scientific ocean.
Automatic segmentation and tracking for 3D time-lapse microscopy
Next-generation sequencing short reads aligner based on Intel® MIC
Fast, Accurate and Sensitive GPU-based Short Read Aligner
http://dx.doi.org/10.1002/jcc.22968
A pipeline for quantitative proteomics based upon isobaric tags