Quality Assessment Tool for Genome Assemblies
Framework for Systems Biology
Various scripts used in sequencing, annotation and RNAseq analysis
Short-read de novo assembler that identifies chimeric contigs.
BrukerEyes is an open-source package for Bruker datasets management
Exploration of the removal of count variable transcripts.
Quantification of poly(A) sites from 3' end sequencing data
Progressive assembly tool using DNA, protein or profile HMMs as seeds.
Estimates delta13C of species in a microbiome from proteome data
Pascal library for bioinformatics
Visualize genetic code structure from fasta file.
Identification of pathogenic microorganisms in diagnostic samples
Open source electronic lab notebook (ELN) for scientists
MATLAB package to find the miRNAs targeting a list of genes
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
City of Hope CpG Island Analysis Pipeline
Modular and comprehensive toolkit for use in cheminformatics
Hybrid Lineage Transcriptome Explorer
Metagenome Annotation Pipeline
Post-Transcriptional Exon Shuffling (PTES) Identification Pipeline
Exogenous feature extractor from brainwaves