Multiple overlaps of genomic regions
One of the most accurate multiple protein sequence aligners
ERNE - Extended Randomized Numerical alignEr
A fast and sensitive adapter trimmer for illumina paired-end sequences
This application can be used to shuffle sequences in FASTA format.
Multi-technology, INDEL aware error correction for NGS data
Extremely fast NGS read counter
Outputs potential denovo variants from VCF given pedigree information.
Tools for genomic analysis
CARGO - Compressed ARchival for GenOmics
Multiscale Neuroscience and Systems Biology Simulator
An Illumina clone assembly system using SOAPdenovo and ABySS
Standard Bioinformatics Library
OLego – short or long RNA-seq read mapping to discover exon junction
The MATLAB software toolbox for MEG and EEG analysis