BamBam includes numerous tools for analyzing DNA next-generation sequencing data. Tools are provided for calling SNPs and indels, identifying large scale deletions, tabulating counts of mapped reads, methylation analysis, and more.
Depends on SAMtools (http://samtools.sourceforge.net/) and BAMtools (https://github.com/pezmaster31/bamtools).
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Thanks to its clever solutions BamBam! solves the major problems of project management. It minimalizes the risk of losing messages, helps filter information and improves its flow. It contains one work frame for different users.
People who need to deal with different types of tasks and/or are responsible for different kinds of projects can concentrate only on their own work. ...