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  • 1

    LBSP

    Real-Time Processing Library for OSHW Biomedical Sensors

    ...The performances of the different classes given in the size of memory allocated and execution time (number of clock cycles) were analyzed in the low-cost platform Arduino-Genuino. This library is free to use for research. Please cite above publication.
    Downloads: 1 This Week
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  • 2
    TOL

    TOL

    Total Order Labeling for Reachability Queries on Large Dynamic Graphs

    ...Reachability queries on large dynamic graphs: a total order approach. In Proceedings of the 2014 ACM SIGMOD international conference on Management of data (SIGMOD '14). Please cite the paper if you choose to use the code.
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  • 3

    detectMITE

    Detection of Miniature Inverted Repeat Transposable Elements

    detectMITE - a MATLAB-based tool for detecting miniature inverted repeat transposable elements (MITEs) in genomes. [1] Who are we? Please visit website: http://bioinfolab.miamioh.edu [2] How to cite detectMITE? Ye C, Ji G, Liang C (2016) detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes. Sci. Rep. 6, 19688. http://www.nature.com/articles/srep19688 Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. ...
    Downloads: 0 This Week
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  • 4

    detectIR

    Detection of Perfect and Imperfect Inverted Repeats

    detectIR - a MATLAB-based tool for detecting perfect and imperfect inverted repeats in genomes. [1] Who are we? Please visit website: http://bioinfolab.miamioh.edu [2] How to cite detectIR? Ye C, Ji G, Li L, Liang C (2014) detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation. PLoS ONE 9(11): e113349. http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0113349 [3] detectIR user manual Please visit the Wiki page of this website...
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  • 5
    Mr.FSM

    Mr.FSM

    Large-Scale Frequent Subgraph Mining in MapReduce

    ...Large-Scale Frequent Subgraph Mining in MapReduce. In Proceedings of the 30th IEEE International Conference on Data Engineering (ICDE), pages 844-855, 2014. Please cite the paper if you choose to use the program. If having any problems, please report to {wlin1 at ntu dot edu dot sg}.
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  • 6

    Approximate Subgraph Matching Algorithm

    Approximate Subgraph Matching Algorithm for Dependency Graphs

    ...This Java implementation implements our ASM algorithm. See README file: https://sourceforge.net/projects/asmalgorithm/files/ If you use our ASM implementation to support academic research, please cite the following paper: Haibin Liu, Lawrence Hunter, Vlado Keselj, and Karin Verspoor. Approximate Subgraph Matching-based Literature Mining for Biomedical Events and Relations. PLOS ONE, 8:4 e60954, 2013.
    Downloads: 0 This Week
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  • 7

    LBP in multiple platforms

    LBP implementation in multiple computing platforms (ARM,GPU, DSP...)

    ...This is a software toolbox that collects software implementations of the Local Binary Pattern operator in several platforms: - OpenCL for CPU & GPU - OpenCL for GPU (branchless) - C code optimized for ARM - OpenGL ES 2.0 shaders mobile GPUs - C code for TI C64x DSP core (branchless) - C code for TTA processor synthesis If you use the code somewhere, please cite: Bordallo López M., Nieto A., Boutellier J., Hannuksela J., and Silvén O. "Evaluation of real-time LBP computing in multiple architectures," Journal of Real Time Image Processing, 2014
    Downloads: 0 This Week
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  • 8

    Exact Subgraph Matching Algorithm

    Exact Subgraph Matching Algorithm for Dependency Graphs

    ...This Java implementation implements our ESM algorithm. See README file: https://sourceforge.net/projects/esmalgorithm/files/ If you use our ESM implementation to support academic research, please cite the following paper: Haibin Liu, Vlado Keselj, and Christian Blouin. Exploring a Subgraph Matching Approach for Extracting Biological Events from Literature. Computational Intelligence, 2013.
    Downloads: 0 This Week
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