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Showing 5 open source projects for "trb"
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This project includes perl scripts to perform transcriptome reconstruction in bacteria (operons and UTRs). The software was applied to the transcriptome reconstruction of the species Methanococcoides burtonii, if you use it please refer to the following paper (Taha et al., Single TRAM domain RNA-binding proteins in Archaea: functional insights from Ctr3 from the Antarctic methanogen Methanococcoides burtonii - Submitted). The approach used is based on previous results: - Campanaro S, et...
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ClAnSort
Cluster-Analysis and Sort
The ClAnSort (Cluster-Analysis and Sort) - program was written to simplify the analysis of Next Generation Sequencing (NGS) data obtained with Ion Torrent™ Technology using the BIOMED-2 Concerted Action BMH4-CT98-3936 primer sets (IGH, IGK, TRB, TRG and TRD) for amplification [van Dongen, J.J. et al., 2003]. -
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