ClAnSort

Cluster-Analysis and Sort

Brought to you by: silkea

Add a Review

Downloads: 0 This Week

Last Update: 2016-02-14

Download

Add to Preferred Sources

The ClAnSort (Cluster-Analysis and Sort) - program was written to simplify the analysis of Next Generation Sequencing (NGS) data obtained with Ion Torrent™ Technology using the BIOMED-2 Concerted Action BMH4-CT98-3936 primer sets (IGH, IGK, TRB, TRG and TRD) for amplification [van Dongen, J.J. et al., 2003].

Project Activity

See All Activity >

Follow ClAnSort

ClAnSort Web Site

Other Useful Business Software

Veeam Data Platform v13.1 - Get Your Free Trial

Secure by design, portable by default. Recover clean, fast, anywhere. Start a free trial.

Try Veeam Data Platform today. Experience the unified platform that's secure by design, portable by default, and proven to recover clean, fast, and anywhere.

Try it Free

Rate This Project

User Reviews

Be the first to post a review of ClAnSort!

Additional Project Details

Registered

2014-03-27

Report inappropriate content

Recommended Projects

TagDust
Raw sequences produced by next generation sequencing (NGS) machines may contain adapter, linker, barcode and fingerprint sequences. TagDust2 is a program to extract and correctly label the sequences to be mapped in downstream pipelines. TagDust allows users to specify the expected architecture of a read and converts it into a hidden Markov model. The latter can assign sequences to a particular barcode (or index) even in the presence of sequencing errors. Sequences not matching the architecture (primer dimers, contaminants etc.) are automatically discarded
MutAid
MutAid: Sanger and NGS based pipeline for mutation screening.
MPprimer
a program for reliable multiplex PCR primer design
BoClusT
R function for the determination of cluster structure
popoolation
estimate natural variation and positive selection