Search Results for "tpp"

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The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.

... * As of 2019, limited maintenance is being carried out by myself (now in the BioHPC high performance computing group at UTSW), to allow CPFP to install and run on RHEL 7 / CentOS 7, with updated TPP 5.1.0 and search tools. This updated code can be found in the utsw-biohpc branch of the git repository, and may become a 2.2.0 release if time and testing allows. -- David Trudgian - 2019/01/03

A tiny c/c++ preprocessor Library designed as a base interface for higher-level scripting languages It implements everything from the C11 Standard. TPP is written in c, but offers a c++ api for convenience. TPP Is able, to generate 25MB of preprocessed code in 8 seconds Supported compiler extensions are: - __COUNTER__ - __has_include - __BASE_FILE__ - __INCLUDE_LEVEL__ - Multi-char constants - #pragma once - #include_next - #warning - Oh who am I kidding; this supports pretty much everything. - If a pp-extension isn't supported and isn't on the todo-list, tell me about it New extensions include: - __TPP_COUNTER - __TPP_RANDOM - __TPP_EVAL - __TPP_LOAD_FILE

HPC Challenge benchmark consists of 7 tests: (1) HPL - the Linpack TPP benchmark which measures the floating point rate of execution for solving a linear system of equations. (2) DGEMM - measures the floating point rate of execution of double precision real matrix-matrix multiplication. (3) STREAM - a simple synthetic benchmark program that measures sustainable memory bandwidth (in GB/s) and the corresponding computation rate for simple vector kernel. (4) PTRANS (parallel matrix transpose) - exercises the communications where pairs of processors communicate with each other simultaneously - a useful test of the total communication capacity of the network. (5) RandomAccess - measures the rate of integer random updates of memory (GUPS). (6) FFT - measures the floating point rate of execution of double precision complex one-dimensional Discrete Fourier Transform (DFT). (7) Communication bandwidth and latency test for simultaneous communication patterns. http://icl.cs.utk.edu/hpcc

A tool for extracting and preprocessing spectral count data for label-free quantitative proteomic analysis. This program is designed to be used with the Trans-Proteomic Pipeline (TPP).

A compiler for tpp language developed for the discipline of compilers of the federal technological university of Paraná in 2016/1

Luciphor is a program that performs phospho-site localization on MS/MS data processed by the Trans-Proteomic Pipeline (TPP). It is the first phospho-site prediction program to provide estimates for the false localization rate (FLR). The program is multithreaded and written in C++ for linux.

I make Youtube videos and twitch.tv livestreams showing games, the community, and much more.

This program parses data out of the interact*.xml files generated by the Trans-Proteomic Pipeline (TPP). It reads in a folder of such files and either makes a tab-delimited file or loads the data into a MySQL database.

This game is very similar to previous productions like Croc - so it is a 3D TPP Adventure game. Its main goal is to create great gameplay and use all advanced technology that provide new video cards.