Search Results for "cross correlation"
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Showing 21 open source projects for "cross correlation"
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CausalityTools.jl
Algorithms for detecting associations, dynamical influences
CausalityTools.jl is a package for quantifying associations and dynamical coupling between datasets, independence testing, and causal inference. Association measures from conventional statistics, information theory, and dynamical systems theory, for example, distance correlation, mutual information, transfer entropy, convergent cross mapping and a lot more. A dedicated API for independence testing, which comes with automatic compatibility with every measure-estimator combination you can think... -
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Adherence terapeutic
Development of a scale that measures adherence in chronic patients
The different studies have shown the lack of a universal measurement system or gold standard, for which a scale has been developed using the most representative theoretical and empirical models, the objective is to validate the scale and verify the factors that influence. Validation study is carried out through a cross-sectional descriptive observational study of nursing consultations, of chronic patients, located in a hospital. Reliability of 0.846 is obtained from the scale under study... -
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CT4AM
Tools for 3D image analysis of additively manufactured parts
CT4AM is a cross-platform toolkit for 3D-image processing in the domain of additive manufacturing for toolpath visualisation or correlation to tomographic data and related materials science. It is written in C++ and provides small, problem-specific applications for viewing, analysing and visualising of volumetric data from micro-CT scans with respect to the complex process parameters and characteristics of additive manufacturing. Moreover, data analysis and processing of G-code are key assets... -
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Euler Pole Calculator (EPC)
A Matlab software to estimate Euler pole parameters
The EPC software calculates the expected velocities for any points located on the earth’s surface given the relevant Euler pole parameters and estimates the Euler pole parameters given the observed velocities of a set of sites located on the same tectonic plate.In version 2, the software is able to estimate or apply the origin rate bias (ORB) in the direct and inverse Euler pole problems. Keywords: Direct Euler pole problem, Inverse Euler pole problem, Origin rate bias. -
Desktop Central is a unified endpoint management (UEM) solution that helps in managing servers, laptops, desktops, smartphones, and tablets from a central location.
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StatAnt
The cross-platform package for statistical data analysis
The high performance open source package for statistical data analysis StatAnt is a standalone cross-platform application. Completely free. No donation required. StatAnt comes with absolutely no warranty. -
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YeastpRofileSpearman
Software to calculate profiles around TSS and TTS of yeast mRNAs
... variable values and the TSS (or TTS) counts at incremental shifting of transcribed strand. The data of TSS and TTS counts used to compute the cross-correlation profiles were taken from the work of Pelechano et al. (1). The input file must be a BedGraph formatted file based on yeast genome sequence release R64. The output file is a text tab-delimited table reporting Rs values for the various shifts of variable coordinates with respect to TSS or TTS. 1) V. Pelechano et al., Nature, 497 (2013) 127-13. -
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EMAP
A Cloud-Edge Framework for EEG Monitoring and Real-time Anomaly Pred.
... 2020 (DAC 2020). In case of usage please refer to: B. S. Prabakaran, A. G. Jiménez, G. M. Martínez, M. Shafique, “EMAP: A Cloud-Edge Hybrid Framework for EEG Monitoring and Cross-Correlation Based Real-time Anomaly Prediction”, IEEE/ACM 57th Design Automation Conference (DAC), July, 2020, (Accepted). -
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CorNetMap
A tool for Gene Expression Correlation Network
Capabilities of CorNetMap: 1. Read data as tab-delimited text file. Can be used for analysis of any data set beyond gene expression. 2. Capable of both two-dimensional and multidimensional data analysis. 3. Calculate Pearson correlation and cross-correlation for analysis data with phase difference. 4. Generate correlation Heat-map and draws network map. 5. Save correlation data as text file. How to use and doccumentation: https://sourceforge.net/projects/cornetmap/files... -
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Volterra2.0
Volterra series Identification Tool
... identified with a cross-correlation method. DOI:10.1007/s11071-014-1631-7. pp.2861-2869. In NONLINEAR DYNAMICS - ISSN:0924-090X vol. 78 (4) 2014. -
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DE-HEoC
DE-based Weight Optimisation for Heterogeneous Ensemble
We propose the use of Differential Evolution algorithm for the weight adjustment of base classifiers used in weighted voting heterogeneous ensemble of classifier. Average Matthews Correlation Coefficient (MCC) score, calculated over 10-fold cross-validation, has been used as the measure of quality of an ensemble. DE/rand/1/bin algorithm has been utilised to maximize the average MCC score calculated using 10-fold cross-validation on training dataset. The voting weights of base classifiers... -
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GPS Interactive Time Series Analysis
A software for processing and analyzing time series in Earth Science
Along with calculating basic statistics and quality parameters such as mean and variance, the soft-ware is capable of importing and visualizing different standard time series formats, determining and removing jumps and outliers, and makes numerical and publication quality graphical outputs. Bivariate statistical analysis (including correlation coefficient and linear regression) and time series analysis (including auto and cross-spectral analysis, wavelet power spectrum, spectrogram... -
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Advanced Normalization Tools ( ANTs )
Multidimensional image registration, segmentation and statistics
Image registration with variable transformations (elastic, diffeomorphic, diffeomorphisms, unbiased) and similarity metrics (landmarks, cross-correlation, mutual information, etc). Image segmentation with priors & nonparametric, multivariate models. *** Current ANTs code and support is hosted at Github *** The best way to get ANTs is to compile from source. Build instructions are here https://github.com/ANTsX/ANTs/wiki/Compiling-ANTs-on-Linux-and-Mac-OS Binaries (updated infrequently... -
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data... -
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PANet
climate networks
PANet is a small C++ code that computes cross correlations between a set of time series, based on small snapshots of the data, in order to see the dynamical evolution of the relations between each two time series. Its most important output is the highest peak of the cross correlation function. It also gives info such as the second peak, the time delays of both peaks, and the standard deviation of the cross correlation function. There is also a built in option for a phase synchronization based... -
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ArchTEx
Accurate Extraction and Visualization of Next-Generation Sequence data
Quick extraction and visualization of NGS Data. Allows for calculation of strand cross-correlation to identify optimal short-read tag extension. Allows for extraction of data using a variety of data transformations. Performs genome-genome correlation of BAM files to assist in comparison of biological and technical replicates. http://bioinformatics.oxfordjournals.org/content/early/2012/02/02/bioinformatics.bts063.abstract -
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Virtual Stereoplotter
The Digital Stereo Aerial Photograph Processing Software
Virtual Stereoplotter is a digital stereo aerial photograph processing software that built by using Visual Basic 2010 Express based on integrating the open source components and libraries which are DotSpatial 1.2, GeoStatisticalTool, MathNet.Numerics and ZedGraph. This software capable to perform the Interior Orientation, Cross Correlation, Single Model Bundle Adjustment, Inverse Distance Weighted and Median Filtering to obtain Digital Surface Model (DSM) with spatially referenced in raster... -
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NCC/FASTNCC(DELPHI/PASCAL)
normalized cross correlation algorithm in DELPHI / PASCAL
this project is a public implementation of the normalized cross correlation algorithm. the performance will be much worse in comparison to commerical products, it is made for training and education purpose only. the project is done with DELPHI XE2 but you should be able to run that code with minor changes also with older compiler versions of DELPHI or even with FREE PASCAL LAZARUS . if you search for FAST NCC you will see a lot of pages explaining how to speed up that simple implementation, i... -
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Tangerine is a protein sequence alignment tool based on cross-correlation. Its aim is to provide maximum sensitivity while being computationally efficient.
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Software Oscilloscope, Stimulus/Function Generator, Data acquisition and real-time analysis for applications in neurophysiology, behavioral biology, and beyond
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A suite of programs for performing particle image velocimetry, a common technique in the field of fluid mechanics. The suite includes programs to perform cross-correlation, synthetic image generation, as well as graphical visualization.
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This Java native library wraps OpenCV (Computer Vision Lib.) function cvMatchTemplate and implements methods for utilities result visualization. It allows efficient images template matching using Normalized Cross-Correlation (NCC) and others algorithms.
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