Search Results for "reference" - Page 54
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Showing 2124 open source projects for "reference"
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BibDeskWord-OSCOLA
Reference Management on the Mac
Implements a OSCOLA compatible citation management for BibDesk and Microsoft Word on the Mac using AppleScript. See the Wiki for more details. -
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Graphical Grammar Studio
An user friendly grammar tool for natural language processing tasks
...GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited and applied. A grammar is organized in graphs of nodes. Nodes are used for consuming words from the input, for executing jumps to other graphs in the grammar or for creating annotations etc. GGS has a unique feature: It allows the user to write JavaScript code to be executed for nodes of the grammar. ... -
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WARNING: Project moved to http://github.com/scemama/irpf90 IRPF90 is a Fortran90 preprocessor written in Python for programming using the Implicit Reference to Parameters (IRP) method. It simplifies the development of large fortran codes in the field of scientific high performance computing.
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Workshop Organizer
Light-weight & cross platform inventory controller for home-workshops
Workshop Organizer is light-weight, cross platform inventory controller for home-workshops. This application is specifically design to manage electronic/electrical components at home-workshops, but it can use to manage other areas of workshop including tools, machinery and mechanical components, etc. -
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MQ Dataset Generator
Dataset Generator
...Obtaining the necessary test data sets can be an obstacle due to both privacy issues and also the time and cost associated with collecting multiple instances of a diverse set of data sources. An efficient alternative is the design and use of synthetic reference data sets to undertake black-box testing. These data sets should be generated in a manner consistent with the functional specification of the problem addressed by the method/software. According to this approach a data set generator was developed for the evaluation of preference disaggregation methods that are used for customer satisfaction analysis, like MUSA (Multicriteria Satisfaction Analysis). -
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CoDeCZ
Derive copy number status from targeted sequencing data
...Results are NOT true copy number however, but they are semi-quantitative: It uses the modified z-score to calculate deviation in normalized coverage per specified region. The higher the Z-score, the higher the copy number. The final z-score depends on the quality of the data and the makeup of the reference pool. -
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VIGOR3
Annotation of Viral Genomes
VIGOR is a tool for annotating coding genes in viral genomes. It was developed by Jeffrey Hoover and Shiliang Wang for The JCVI Genomic Sequencing Center for Infectious Diseases (GSCID). http://www.biomedcentral.com/content/pdf/1471-2105-11-451.pdf contact: Jeff Hoover 301-540-7858 jefhv@aol.com -
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Network Packet Cleaner
Easily clean your pcap dump files
New: Network View... still bugged but I'm working on it Add multiple reference hosts (for futur dump correlation) This tool helps you to easily clean a "pcap" file by manipulating graphically hosts, connections, sessions. Automatically suppress non TCP and non UDP traffic. Can use tshark to decode frames. Can save cleaned capture to pcap file format. See https://sourceforge.net/p/netpackclean/wiki/?source=navbar for Changelog -
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SeqSelector
Tools to select sequences for capture enrichment of next-gen libraries
...We suggest a workflow in which genes of interest are first identified from previous studies and publicly available datasets of functional gene annotation. Once a list of candidate genes has been identified, their sequences are selected from the reference genome. These sequences are used as a query during a BLAST search of the unannotated genome of a non-model species, and then the corresponding sequences are returned, which can be used to design baits for hybridization-based sequence capture. -
Atera all-in-one platform IT management software with AI agentsAtera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
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acp245
ACP245 Suite: Brazil Telematics protocol implementation
This "suite" includes a portable reference implementation and testing tools for ACP245, the automotive Telematics protocol defined by Brazil government. see: http://www.denatran.gov.br/simrav/simrav.asp -
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Docear
An Academic Literature Suite
Docear (pronounced dog-ear) is what we call an “academic literature suite”. It integrates everything you need to search, organize and create academic literature in a single application: a digital library, reference manager, PDF and file manager, note taking and mind mapping. And the best: Docear works seemlessly with many existing tools like Mendeley, Microsoft Word, and Foxit Reader. Docear is free and open source, based on Freeplane, funded by the German Federal Ministry of Technology and developed by scientists from around the world, among others from OvGU, and the University of California, Berkeley. -
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We developed a novel mining pipeline, inGAP, which is guided by a Bayesian principle to detect single nucleotide polymorphisms, insertion and deletions by comparing high-throughput pyrosequencing reads with a reference genome of related organisms.
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Ruby Serial
Optimized serialization library for Ruby objects.
Library serializing Ruby objects, optimized in many ways: * Fast and small: use MessagePack (binary compact storage) and don't serialize twice the same object * Independent of Ruby version: dump and load data across different versions * Keep shared objects: if an object is shared by others, serialization still keeps the reference and does not duplicate objects in memory * Gives the ability to fine tune which attributes of your objects are to be serialized (defaults to all) * Keeps backward compatibility with previously serialized versions * Has callbacks support to fine tune the serialization process * Can serialize objects having reference cycles (self-contained Arrays, Hashes, objects...) -
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Strum By Jdo
A simple modal scale reference.
A chrome extension that takes root note and mode as parameters and returns the modal scale in that key with the basic major, minor, diminished chords. -
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PHDL
An HDL alternative to PCB graphical schematic capture tools.
PHDL is an HDL that functions as an alternative to mainstream graphical schematic capture tools. The language is compiled into a pcb netlist which can then be imported into a layout tool. We are currently on version 2.1 of the tool. We have created an eclipse plugin version of the tool as well as a standalone command-line based version. Both function identically and output a netlist that can be imported into a pcb layout tool. VHDL revolutionized how FPGA designs and digital logic... -
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Mobster
Mobster: a robust tool for Mobile Element Insertion detection in NGS
Mobster is used to detect novel (non-reference) Mobile Element Insertion (MEI) events in BAM files and uses both a discordant read pair method and a split-read method. -
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A Binary Decision Diagram library, with : many highly efficient vectorized BDD operations, dynamic variable reordering, automated garbage collection, a C++ interface with automatic reference counting, and much more.
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Nonlocal and Gradient Elasticity
Assessment of high order one-dimensional approximation schemes
These Matlab scripts illustrate the numerical solution of two one-dimensional tensile rods equipped with integro-differential and strain-gradient constitutive laws by means of classical Hermitian and Lagrangian finite element discretizations, B-spline finite element discretizations and C∞ generalized finite element discretizations. Reference M. Malagù, E. Benvenuti, C. A. Duarte, and A. Simone. One-dimensional nonlocal and gradient elasticity: Assessment of high order approximation schemes. Computer Methods in Applied Mechanics and Engineering, accepted for publication, 22 February, 2014 (www.sciencedirect.com/science/article/pii/S0045782514000723) -
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NXShield API's and Documentation Online API reference available at: http://www.openelectrons.com/NXShield/html/
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Simple RTS MMO Colab
PHP & MySQL MMO RTS Engine and Learning Tool
...Features: An income system of gold and food Purchase attack/defense units Purchase farmers/miners Equip all units with proper equipment for bonuses PvP with simple battle system and rewards Clearly marked variables for easy reference to tables Clean-ish code -
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Badges
Readme Badges – Gotta catch 'em all
Badges is a utility / site that generates small status badge images for open-source projects (for example, build status, coverage, downloads, version). It allows projects to easily embed dynamic badges in their README or documentation that reflect project metadata or external service metrics. The badges system supports different styles, icons, and dynamic links, making them visually consistent and informative. It abstracts the generation of badge SVGs so the end user doesn’t need to manually... -
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Old School Tool
Old School gaming tool for GMs of AD&D/OSRIC.
A java based tool that takes load off the AD&D or OSRIC GM by being able to quickly load creatures encountered and manage the combat quickly without having to reference attack matrix, hd calculations or other charts and tables. With the press of a few buttons a GM can create an encounter and then cycle through the rounds of combat easily finding the AC the creature hit, damage done and other basic information. Does NOT require a network connection to work and should run on just about any operating system or hardware. ... -
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constrainedLATIN
A one-dimensional implementation of a constrained LATIN method
constrainedLATIN illustrates a simple one-dimensional implementation of a constrained LATIN method for modelling quasi-brittle failure. Unlike classical LATIN methods, this novel algorithm can trace snap-back responses. Reference B. Vandoren, K. De Proft, A. Simone, and L. J. Sluys. A novel constrained LArge Time INcrement method for modelling quasi-brittle failure. Computer Methods in Applied Mechanics and Engineering, 265:148-162, 2013 -
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NSIT
Novel Sequence Identification Tool
NSIT (Novel Sequence Identification Tool) is an efficient software for identifying novel sequences in a de novo human genome assembly. Novel sequences are defined as DNA sequences in the de novo assembly that are longer than 100 bp, not known-repeats, and not present in the reference assembly. NSIT was written in C++ and runs on both 32-bit and 64-bit Linux machines. It requires about 2 GB of RAM. NSIT comes with a JAVA graphical viewer which can be used to view how the identified novel sequences compare with other sequence sets.
