CoDeCZ derives copy number state from targeted sequencing data on gene or exon level.
Results are NOT true copy number however, but they are semi-quantitative:
It uses the modified z-score to calculate deviation in normalized coverage per specified region. The higher the Z-score,
the higher the copy number. The final z-score depends on the quality of the data and the makeup of the reference pool.

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Bio-Informatics

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Additional Project Details

Operating Systems

BSD, Linux

Programming Language

Unix Shell

Related Categories

Unix Shell Bio-Informatics Software

Registered

2014-01-08